Query= MSMg01no053_g04.b1 MSMg01no053_g04.b1 CHROMAT_FILE:
MSMg01no053_g04.b1 PHD_FILE: MSMg01no053_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:17 2005
(280 letters)
>mm_chr9_20950019_20950695
Length = 677
Score = 511 bits (264), Expect = e-149
Identities = 275/280 (98%), Gaps = 3/280 (1%)
Strand = Plus / Plus
Query: 1 attggaaggagccagacgaaaccccacataccacatgtctggccacagagcctaggaggg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 attggaaggagccagacgaaaccgcacataccacatgtctggccacagagcctaggaggg 260
Query: 61 tgggctgggaactcactccccctttcccaaacctccacatctttttttttttttttggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 tgggctgggaactcactccccctttcccaaacctccacatctttttttttttt---ggta 317
Query: 121 gggacctaccagggactaaacccagtgtcagggatcagggactgaacccagtgtcgcgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gggacctaccagggactaaacccagtgtcagggatcagggactgaacccagtgtcgcgca 377
Query: 181 cttgctccccaagcggcctgctactgagctgcacatactgcacaccgcccttttgcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 378 cttgctccccaagcggcctgctactgagctgcacatactgcacaccgcccttttgtattt 437
Query: 241 cctagtttgacctggtgttgccttatgttgttgaggctgg 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cctagtttgacctggtgttgccttatgttgttgaggctgg 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 677
Length adjustment: 9
Effective length of query: 271
Effective length of database: 668
Effective search space: 181028
Effective search space used: 181028
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_g04.g1 MSMg01no053_g04.g1 CHROMAT_FILE:
MSMg01no053_g04.g1 PHD_FILE: MSMg01no053_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:17 2005
(292 letters)
>mm_chr7_117466218_117466909
Length = 692
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 1 tctaatagagaactggacctttcttcctctggaaatggtgacttgggatggcctctgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tctaatagagaactggacctttcttcctctggaaatggtgacttgggatggcctctgact 433
Query: 61 actgaatgtttgttcccatgtttgctggactagtttgtccttgcaggctactccatctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 actgaatgtttgttcccatgtttgctggactagtttgtccttgcaggctactccatctga 373
Query: 121 gcatactgcagtttctgcctccccaggattcaggaagccagggtccatcctcagctcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gcatactgcagtttctgcctccccaggattcaggaagccagggtccatcctcagctcatc 313
Query: 181 cccttcactggctacacaactctatgaatcaccaggtctccgcatgtacactaattccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cccttcactggctacacaactctatgaatcaccaggtctccgcatgtacactaattccac 253
Query: 241 ccagaatcttgagccagaaagctttgcttgacatcagaggacaggtcaggga 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ccagaatcttgagccagaaagctttgcttgacatcagaggacaggtcaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
