Query= MSMg01no053_k13.b1 MSMg01no053_k13.b1 CHROMAT_FILE:
MSMg01no053_k13.b1 PHD_FILE: MSMg01no053_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:38 2005
(415 letters)
>mm_chr9_46863483_46864298
Length = 816
Score = 758 bits (392), Expect = 0.0
Identities = 407/412 (98%), Gaps = 1/412 (0%)
Strand = Plus / Plus
Query: 5 gaattca-atccctgccgtgcagagatcattcctcaggaggcaggttcagaacaatgccg 63
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatccctgcagtgcagagatcattcctcaggaggcaggttcagaacaatgccg 264
Query: 64 cgtcctcttaccccatcttctgggctaataatacgattcatcaccgtctcaacagcaaat 123
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 cgtcctcttaccccatcttctgggctaataatatgattcatcaccgtctcaacagcaaat 324
Query: 124 gaaagggagagcgcaggcatccctttaattacataaaatgccctgatacctagcccagcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaaagggagagcgcaggcatccctttaattacataaaatgccctgatacctagcccagcc 384
Query: 184 tagtaaatcactcagcttctggtcatgtgctgcctgggaaaggcagaaggtgagtggatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagtaaatcactcagcttctggtcatgtgctgcctgggaaaggcagaaggtgagtggatc 444
Query: 244 accacaaacctgccaagactagtaggaggtaactacctactgtgtacacacacggatgtt 303
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 accacaaacctgccaagactagtaggaggtaactacctactgtgtgcacacacggatgtt 504
Query: 304 ccactccaaaaaaatgaacaacagatggaaatgttacagaggcagtttctgcttcttagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccactccaaaaaaatgaacaacagatggaaatgttacagaggcagtttctgcttcttagg 564
Query: 364 tgtcacctcatacacccaaggtaaaccacaccccttatgaacatgctggatt 415
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 565 tgtcacctcatacacccaaggtaaaccacaccccttgtgaacatgctggatt 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 816
Length adjustment: 9
Effective length of query: 406
Effective length of database: 807
Effective search space: 327642
Effective search space used: 327642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_k13.g1 MSMg01no053_k13.g1 CHROMAT_FILE:
MSMg01no053_k13.g1 PHD_FILE: MSMg01no053_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:38 2005
(234 letters)
>mm_chr9_97984050_97984683
Length = 634
Score = 410 bits (212), Expect = e-119
Identities = 228/234 (97%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 1 acagcaagacagaaggtatgagatatgaggggaatgcacacacacacacacacacacaca 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 203 acagcaagacagaaggtatgggatatgaggggaatgcacacacacacacacacacacaca 262
Query: 61 cacacacacacacacacacacacatgggaggcaggaagtaccacgagctgtgtagggtgt 120
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 263 cacacacacacacacacacacac--gggaggcaggaagtaccatgagctgtgtagggtgt 320
Query: 121 atcgggactgtaccatgaaagtgtgaggacagccgggttattggtacagttggcctcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcgggactgtaccatgaaagtgtgaggacagccgggttattggtacagttggcctcttt 380
Query: 181 atttgccccttgcctctctcttgtcccccaagaaagaattttatgctgcaccga 234
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 381 atttgccccttgcctctctctcgtccctcaagaaagaattttatgctgcaccga 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
