Query= MSMg01no054_c04.b1 MSMg01no054_c04.b1 CHROMAT_FILE:
MSMg01no054_c04.b1 PHD_FILE: MSMg01no054_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:15 2005
(107 letters)
>mm_chr9_56766752_56767258
Length = 507
Score = 182 bits (94), Expect = 6e-51
Identities = 103/106 (97%)
Strand = Plus / Minus
Query: 1 agaggcctcttaggcagagtaccgggtgtgaactgtcatgtgcagtcagtgaagagccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agaggcctcttaggcagagtaccgggtgtgaactgtcatgtgcagtcagtgaagagccag 247
Query: 61 gcacagcatctagcttaggaaatatctttggggacggtgaaataga 106
||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 246 gcacagcatctagcttaggaaatatctttggatactgtgaaataga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 107
Length of database: 507
Length adjustment: 8
Effective length of query: 99
Effective length of database: 499
Effective search space: 49401
Effective search space used: 49401
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no054_c04.g1 MSMg01no054_c04.g1 CHROMAT_FILE:
MSMg01no054_c04.g1 PHD_FILE: MSMg01no054_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:15 2005
(335 letters)
>mm_chr9_56598628_56599361
Length = 734
Score = 588 bits (304), Expect = e-172
Identities = 327/336 (97%), Gaps = 6/336 (1%)
Strand = Plus / Plus
Query: 1 ccagtttggaaacagcagaccttcaccaaggcttgtaatggattatcagaacatgaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagtttggaaacagcagaccttcaccaaggcttgtaatggattatcagaacatgaaggg 260
Query: 61 ttagggttagggttagggtttaaatttaggatttaaatttaggattaaatttaggattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagggttagggttagggtttaaatttaggatttaaatttaggattaaatttaggattta 320
Query: 121 aatatgcttccagaaactacaggtatcaagtatagtacacacctgctccgcaagccttgg 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aatatgcttccagaaactacaggtatcaagtgtagtacacacctgctccgcaagccttgg 380
Query: 181 aattaaagagaggggccctttgaaatattcagggtgagaggaccacctgaaattcttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattaaagagaggggccctttgaaatattcagggtgagaggaccacctgaaattcttttt 440
Query: 241 ttttttttatgtttgagtttctcaccccccc-cccaaaaaaaaaaccaatcgtggaattc 299
|||||| ||||||||||||||| ||||||| ||||||||||||| || | ||||||||
Sbjct: 441 tttttt--atgtttgagtttctccccccccctcccaaaaaaaaaa--aacc-tggaattc 495
Query: 300 tatacccagccagactatcagccatgatgcgagaca 335
||||||||||||||||||||||||||||||||||||
Sbjct: 496 tatacccagccagactatcagccatgatgcgagaca 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 734
Length adjustment: 9
Effective length of query: 326
Effective length of database: 725
Effective search space: 236350
Effective search space used: 236350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
