Query= MSMg01no054_c22.b1 MSMg01no054_c22.b1 CHROMAT_FILE:
MSMg01no054_c22.b1 PHD_FILE: MSMg01no054_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:18 2005
(244 letters)
>mm_chr9_114860901_114861548
Length = 648
Score = 391 bits (202), Expect = e-113
Identities = 235/248 (94%), Gaps = 4/248 (1%)
Strand = Plus / Minus
Query: 1 ttagtgagacactaaatcaaaaaaaaaagtaaaatataattagagcttatactagaatca 60
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 320 ttagtgagacactaaatcaaaaaaaaaattaaaatataattagagcttttactagaatca 261
Query: 61 gagtatttttggcc----aaaaaaaattgtcttcagttatttaatctgttttgctcttta 116
|||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 260 gagtatttttggccaaaaaaaaaaaaatgtcttcagttatttaatctgttttgttcttta 201
Query: 117 tttttggcagtgttgagggtccagcccagggccttgagtagttgctctatcaccgagtca 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 200 tttttggcagtgttgagggtccagcccagggccttgagtagttgctctatcaccaagtca 141
Query: 177 catgtgcaaacataatgggaaagacctttagtatatgtggctggggagatgccccatggg 236
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 140 catctgcaaacttaatgggaaagacctttagtatatgtggctggggagatgccccatgag 81
Query: 237 ggaagcac 244
||| ||||
Sbjct: 80 ggaggcac 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 648
Length adjustment: 9
Effective length of query: 235
Effective length of database: 639
Effective search space: 150165
Effective search space used: 150165
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no054_c22.g1 MSMg01no054_c22.g1 CHROMAT_FILE:
MSMg01no054_c22.g1 PHD_FILE: MSMg01no054_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:19 2005
(294 letters)
>mm_chr9_114702854_114703547
Length = 694
Score = 507 bits (262), Expect = e-148
Identities = 286/294 (97%)
Strand = Plus / Plus
Query: 1 tcccagtgtcaaaggcatgaaccaggggctgggcatgccatgtcttttatagcaggagca 60
||||||||||||||||| || |||||| |||||||||||||||||| |||||||||||||
Sbjct: 201 tcccagtgtcaaaggcacgagccagggactgggcatgccatgtcttctatagcaggagca 260
Query: 61 accttcgggtttaaggctcacctaggggcaggaggctaggaaaggcatgtcattgaggga 120
|||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 accttcgggtataaggctgacctaggggcaggaggctaggaaaggcatgtcactgaggga 320
Query: 121 gagggagcggggccccagccctggtggctgctgagagggtggggggaaggatgtggcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagggagcggggccccagccctggtggctgctgagagggtggggggaaggatgtggcaga 380
Query: 181 cagagctggctgacctgcagacattcacttctccaaagtcaccagctctggtcagcaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 cagagctggctgacctgcagacattcacttctccaaagtcaccagctctggccagcaagg 440
Query: 241 actaacggacattcagctactggaagggacaatggctttcctttcctttatgta 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actaacggacattcagctactggaagggacaatggctttcctttcctttatgta 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
