Query= MSMg01no056_c16.b1 MSMg01no056_c16.b1 CHROMAT_FILE:
MSMg01no056_c16.b1 PHD_FILE: MSMg01no056_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:45 2005
(194 letters)
>mm_chr9_50505147_50505740
Length = 594
Score = 358 bits (185), Expect = e-103
Identities = 191/193 (98%)
Strand = Plus / Minus
Query: 1 atttctgaacactacttgctgaccaccctcgctggtctcaccggtttgatctatgcacct 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 393 atttctgaacactacttgctgaccacccttgctggtctcaccggtttgatctatgcacct 334
Query: 61 acagatatttagataaagccgcttactttgatctgcaatgatgcgaagctttaaattttt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 333 acagatatttagataaagccgcttactttgatctgcaatgatgtgaagctttaaattttt 274
Query: 121 tcttaaatgttttaagaaagaagagagcagagtaccaaccgggacatctccactaaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tcttaaatgttttaagaaagaagagagcagagtaccaaccgggacatctccactaaagct 214
Query: 181 ggtcagcagtgga 193
|||||||||||||
Sbjct: 213 ggtcagcagtgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_c16.g1 MSMg01no056_c16.g1 CHROMAT_FILE:
MSMg01no056_c16.g1 PHD_FILE: MSMg01no056_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:45 2005
(546 letters)
>mm_chr9_50385123_50386067
Length = 945
Score = 571 bits (295), Expect = e-167
Identities = 304/307 (99%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 240 cagggccaggagactaatgggagggctttgtaaggtctgagaacgtggacagcgtgagtc 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cagggccaggagacgaatgggagggctttgtaaggtctgagaacgtggacagcgtgagtc 499
Query: 300 aaaatgtaaggaaacaaaagggcaggaggctggtcagacagtaagacagtggaacctctg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaaatgtaaggaaacaaaagggcaggaggctggtcagacagtaagacagtggaacctctg 559
Query: 360 gccggagagtagctccaagcacaaacaggaaacagagtgtcttataagcggatgaatgca 419
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 560 gccggagagtagctccaagcacaaacaggaaacagagtgtcttagaagcggatgaatgca 619
Query: 420 gcagtcagcttgatcattgctgcacctagaggtatgtactgactctagagaacagtagta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcagtcagcttgatcattgctgcacctagaggtatgtactgactctagagaacagtagta 679
Query: 480 ctcggtctatttgttatctggaaaaaaaaaaaacctaactattaatgattcaatgtatat 539
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 680 ctcggtctatttgttatctggaaaaaaaaaaa-cctaactattaatgattcaatgtatat 738
Query: 540 tatagga 546
|||||||
Sbjct: 739 tatagga 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 945
Length adjustment: 10
Effective length of query: 536
Effective length of database: 935
Effective search space: 501160
Effective search space used: 501160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
