Query= MSMg01no056_d01.b1 MSMg01no056_d01.b1 CHROMAT_FILE:
MSMg01no056_d01.b1 PHD_FILE: MSMg01no056_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:47 2005
(458 letters)
>mm_chr9_60090364_60091221
Length = 858
Score = 791 bits (409), Expect = 0.0
Identities = 442/453 (97%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 7 ggaattcaaagatgtcttcccctacatgagttcaaggccaacctgggctacatgaataag 66
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggaattcaaagatgtcctcagctacatgagttcaaggccaacctgggctacatgaataag 531
Query: 67 accctgtctc-aaaaaaaacaaaaaggtcctaagaaatagagggaatgccctctccagtg 125
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 accctgtctcaaaaaaaaaaaaaaaggtcctaagaaatagagggaatgccctctccagtg 471
Query: 126 tgggatgtcttcccttcccaaagcagcgttagtaccctgtaagtgcatggtgaatagcca 185
|||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 470 tgggatgtcttcgctttccaaagcagcgttagtaccctgtaagtgcatggtgagtagcca 411
Query: 186 ggcagggcagagtggtggcaccaatgggtcagggctgtgggtggctgactgacaagctag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggcagggcagagtggtggcaccaatgggtcagggctgtgggtggctgactgacaagctag 351
Query: 246 ataggctggtgcacaggtggggatgtttaaattaaacacaagcttggacaggatcacccc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ataggctggtgcacaggtggggatgtttaaattaaacacaagcttggacaggatcacccc 291
Query: 306 tatgttgtggatttggcctaatgctgcttgtgttgtataatttggtccccaaaattgcct 365
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tatgttatggatttggcctaatgctgcttgtgttgtataatttggtccccaaaattgcct 231
Query: 366 gggactcttaaagacccacctctgtcttcacatacaagttaggcccagccattgagctat 425
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 230 gggactcttaaagacccacctctgtcttcacgtagaagttaggcccagccattgagctat 171
Query: 426 ttaaggcatattagaatataaaggctgcttgta 458
|||||||||||||||||||||||||||||||||
Sbjct: 170 ttaaggcatattagaatataaaggctgcttgta 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_d01.g1 MSMg01no056_d01.g1 CHROMAT_FILE:
MSMg01no056_d01.g1 PHD_FILE: MSMg01no056_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:47 2005
(442 letters)
>mm_chr9_60025683_60026524
Length = 842
Score = 832 bits (430), Expect = 0.0
Identities = 439/442 (99%)
Strand = Plus / Plus
Query: 1 caggccagcctggggcataggagaccttgtctcaaagtctagtgccttaggtataaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggccagcctggggcataggagaccttgtctcaaagtctagtgccttaggtataaacta 260
Query: 61 ctaaaaatactgcatgaattacctccaggctagctgtacaaaaggcaatttttaaactac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaaaatactgcatgaattacctccaggctagctgtacaaaaggcaatttttaaactac 320
Query: 121 agtgcataagctatggaaaacagcctggcagtcatagaatggcaggaatacacctacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgcataagctatggaaaacagcctggcagtcatagaatggcaggaatacacctacttc 380
Query: 181 atgagtctttgtgaatgggattagagctcttaattaaagaggtcagtgggatctgtttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgagtctttgtgaatgggattagagctcttaattaaagaggtcagtgggatctgtttgt 440
Query: 241 ccccataaccaggcaggatgcagccagaagatgtcacctgcacggtagagccagagccga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccccataaccaggcaggatgcagccagaagatgtcacctgcacggtagagccagagccga 500
Query: 301 caccagacactgagtctgtcagtgcttgatcttaaactcctggcctccagaactgtgagc 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 caccagacactgagtctgtcagtgctagatcttaaactcctggcctccagaactgtgagc 560
Query: 361 catgagtatctgctgcttatcaatgatgtagcctaatgtagttgggtcactgtactccaa 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgagtatctgctgtttatcaatgatgtagcctaatgtagttgggtcactgtactccaa 620
Query: 421 tgaactaatacaacagccaaga 442
|| |||||||||||||||||||
Sbjct: 621 tggactaatacaacagccaaga 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
