Query= MSMg01no056_d22.b1 MSMg01no056_d22.b1 CHROMAT_FILE:
MSMg01no056_d22.b1 PHD_FILE: MSMg01no056_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:51 2005
(413 letters)
>mm_chr9_44140911_44141721
Length = 811
Score = 733 bits (379), Expect = 0.0
Identities = 402/411 (97%), Gaps = 4/411 (0%)
Strand = Plus / Minus
Query: 4 gaattcctttagagtt-gccctctgaaagctgagctacgaatatttgcataatagaggct 62
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaattcctttagagttagcgctctgaaagctgagctacgaatatttgcataatagaggct 552
Query: 63 acaagcccacctggtgaggctgcagatgggacagaaagggagggcaaggcaagatgaaga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 551 acaagcccacctggtgaggctgcagatgggacagaaagggagggcaaggcaagat---ga 495
Query: 123 aagccctaggcaaagtccaactagcggacttcaagtccagcaaggtgtccatccaggaca 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 494 aagccctaggcaaagtccaactagcggacttcaagtccagcaaggtgtccatccaggata 435
Query: 183 tcagtagtcacagatggcagaagccgagaacaaaagtgtcagcgaggcctggaccagagg 242
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 434 tcagtagtcacagatggcagaagctgagaacaaaagtgtcagcgaggcctggaccagagg 375
Query: 243 gtcatctcggaccagacagaggctggccctggctgaggtccaatggagactgtgaggtaa 302
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 374 gtcatctcggaccagacagaggctggtcctggctgaggtccaatggagactgtgaggtaa 315
Query: 303 agggcagctgtcagggagctcagacgtcatagaagagtcggacgagttggtaacgaatgg 362
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 314 agggcagctgtcagggagctcagacatcatagaagagtcggacgagttggtaacgaatgg 255
Query: 363 agaaggtggcggcgctgcttaggacctgggagaagtggactggaattagaa 413
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agaaggtggcggcgctgcttaggacctgggagaagtggactggaattagaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 811
Length adjustment: 9
Effective length of query: 404
Effective length of database: 802
Effective search space: 324008
Effective search space used: 324008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_d22.g1 MSMg01no056_d22.g1 CHROMAT_FILE:
MSMg01no056_d22.g1 PHD_FILE: MSMg01no056_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:51 2005
(361 letters)
>mm_chr9_43981350_43982110
Length = 761
Score = 690 bits (357), Expect = 0.0
Identities = 360/361 (99%)
Strand = Plus / Plus
Query: 1 accgtaaaaggaacctaatatgaacatgaaaataaatttattttggtcaataatttctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accgtaaaaggaacctaatatgaacatgaaaataaatttattttggtcaataatttctgg 260
Query: 61 tcaataatactcagaaatactctaaactaggagaaggaggactgtgtttttgacactaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaataatactcagaaatactctaaactaggagaaggaggactgtgtttttgacactaga 320
Query: 121 tagctactgctctttatgtaaagcggggagggcttcaagaattacttttctctagcaaca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 tagctactgctctttatgtaaagcggggagggcttcaagaattatttttctctagcaaca 380
Query: 181 aatgaaagatggaaataatgtcttacatctctctccaatcaaatgtcacacagcaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgaaagatggaaataatgtcttacatctctctccaatcaaatgtcacacagcaaataa 440
Query: 241 gaagaaaccccacagtcaactctctgagcttacgctgacagggctatatttacttttagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagaaaccccacagtcaactctctgagcttacgctgacagggctatatttacttttagg 500
Query: 301 gagacagttagaggatgcaccaagcaaacataaaaactttgcacagccacaaccacacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagacagttagaggatgcaccaagcaaacataaaaactttgcacagccacaaccacacaa 560
Query: 361 t 361
|
Sbjct: 561 t 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
