Query= MSMg01no056_f06.b1 MSMg01no056_f06.b1 CHROMAT_FILE:
MSMg01no056_f06.b1 PHD_FILE: MSMg01no056_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:57 2005
(327 letters)
>mm_chr9_15594557_15595282
Length = 726
Score = 569 bits (294), Expect = e-166
Identities = 316/324 (97%), Gaps = 5/324 (1%)
Strand = Plus / Minus
Query: 6 gaattctttctctgttg-cttgcttaaag-aaatagtacctctaggagattcaaatgaag 63
|||||||||||||| || | ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 526 gaattctttctctggtgtc-tgcttaaagtaaatagtacctctaggagattcaaatgaag 468
Query: 64 atgaaggctgagtatattgaaccaaaggtcttcaaaaaggagatacagagtaatccagac 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atgaaggctgagtgtattgaaccaaaggtcttcaaaaaggagatacagagtaatccagac 408
Query: 124 aggccagctaactgacttcatgtacgtgacattttttaatagcagttggtaaagtggctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aggccagctaactgacttcatgtacgtgacattttttaatagcagttggtaaagtggctc 348
Query: 184 caggccaaatctgtactctctgctttgttcactgctttgatatcctgtgtggaatgaccc 243
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 caggccaaatctgta--ctctgctttgttcactgctttgatatcctgtgtggaatgaccc 290
Query: 244 tgaaaattacatgtgaaaatggcatctctctgcctgggcttttggatggcaagaagacag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgaaaattacatgtgaaaatggcatctctctgcctgggcttttggatggcaagaagacag 230
Query: 304 agacctcttcatgatggatgtgaa 327
||||||||||||||||| ||||||
Sbjct: 229 agacctcttcatgatgggtgtgaa 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 726
Length adjustment: 9
Effective length of query: 318
Effective length of database: 717
Effective search space: 228006
Effective search space used: 228006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_f06.g1 MSMg01no056_f06.g1 CHROMAT_FILE:
MSMg01no056_f06.g1 PHD_FILE: MSMg01no056_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:57 2005
(136 letters)
>mm_chr9_15482548_15483083
Length = 536
Score = 263 bits (136), Expect = 3e-75
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 1 aattcgaggctgctgcagtactgactggacagccctaccgatttctaacctttgtctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcgaggctgctgcagtactgactggacagccctaccgatttctaacctttgtctctg 260
Query: 61 agtcttcttttccatctttcccataagcctcactcaaccctcagggggctgcttgacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtcttcttttccatctttcccataagcctcactcaaccctcagggggctgcttgacttt 320
Query: 121 gtacctgctggactgg 136
||||||||||||||||
Sbjct: 321 gtacctgctggactgg 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 136
Length of database: 536
Length adjustment: 8
Effective length of query: 128
Effective length of database: 528
Effective search space: 67584
Effective search space used: 67584
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
