Query= MSMg01no056_g04.b1 MSMg01no056_g04.b1 CHROMAT_FILE:
MSMg01no056_g04.b1 PHD_FILE: MSMg01no056_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:02 2005
(238 letters)
>mm_chr9_104571748_104572383
Length = 636
Score = 426 bits (220), Expect = e-124
Identities = 233/238 (97%), Gaps = 2/238 (0%)
Strand = Plus / Minus
Query: 1 gatgggacaggtcatgcacaaaggactaggaacaatactgaaatgaatctccttggacct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gatgggacaggtcatacacaaaggactaggaacaatactgaaatgaatctccttggacct 377
Query: 61 taatctccaatgggtggtgatgtttctgccaaaagtttcaaaatctaggagcttgttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taatctccaatgggtggtgatgtttctgccaaaagtttcaaaatctaggagcttgttttg 317
Query: 121 tgggaaaaaaaaaatgcttttgctcattttatatgagttggtacttcatataaaatcctg 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tggg--aaaaaaaatgcttttgctcattttatatgagttggtacttcatataaaatcctg 259
Query: 181 ctaacacacctaagatcctgacattaacgcaggtggatcttggaagcttggcggaatg 238
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 258 ctaacacacctaagatcctgacattaaggcaggtggatcttgggagcttggcggaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 636
Length adjustment: 9
Effective length of query: 229
Effective length of database: 627
Effective search space: 143583
Effective search space used: 143583
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_g04.g1 MSMg01no056_g04.g1 CHROMAT_FILE:
MSMg01no056_g04.g1 PHD_FILE: MSMg01no056_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:02 2005
(168 letters)
>mm_chr9_104438863_104439430
Length = 568
Score = 311 bits (161), Expect = 1e-89
Identities = 166/168 (98%)
Strand = Plus / Plus
Query: 1 cagaataaatggnatgttgcaggtaaaatagcatggggctcggctaacagtaggtgaata 60
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 cagaataaatggtatgttgcaggtaaaatagcatggggcttggctaacagtaggtgaata 260
Query: 61 tacatcagctaaaagggttttttttttcctaatgaaggggagaaaaattaagggacatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatcagctaaaagggttttttttttcctaatgaaggggagaaaaattaagggacatac 320
Query: 121 cttgagcctcatattgacttcacctgcaaaactgtcttttgggggcaa 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgagcctcatattgacttcacctgcaaaactgtcttttgggggcaa 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
