Query= MSMg01no057_a18.b1 MSMg01no057_a18.b1 CHROMAT_FILE:
MSMg01no057_a18.b1 PHD_FILE: MSMg01no057_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:52 2005
(456 letters)
>mm_chr9_62627892_62628747
Length = 856
Score = 851 bits (440), Expect = 0.0
Identities = 452/456 (99%), Gaps = 1/456 (0%)
Strand = Plus / Plus
Query: 1 ttttgttttgtttttgagtcagtttctttgtagtcctggctatcctggaattcactatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttttgttttgtttttgagtcagtttctttgtagtcctggctatcctggaattcactatgt 261
Query: 61 aaacaccacactggcctagagcccacagatgtacctgcctctacctcccaagtgctgggg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 262 aaacaccacactggcctagagcccacagatgtacctgcctctac-tcccaagtgctgggg 320
Query: 121 ttaaagtcatgtaccactgtgcccattttttttcttcacctaagtttaaaagcaagtcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaaagtcatgtaccactgtgcccattttttttcttcacctaagtttaaaagcaagtcga 380
Query: 181 gggcttggtgtacagctctggtgggggaacgcttgtctggcatacacaaacccttgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcttggtgtacagctctggtgggggaacgcttgtctggcatacacaaacccttgagtt 440
Query: 241 caaccccagaaccatagaaatcaagagtgtagatgtcaccctcttgtgaagtggagacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaccccagaaccatagaaatcaagagtgtagatgtcaccctcttgtgaagtggagacag 500
Query: 301 aagggttgggaattcgagggctagggctaggtagggctaggaaaacgcctcaggtgtttg 360
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 aagggtcgggaattcgagggctagggctaggtagggctaggaaaatgcctcaggtgtttg 560
Query: 361 cctcacaagcatgaaggctgggttcagttcctatggagagcagctgctcatggtggtgca 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 cctcacaagcatgaaggctgggttcagttcctatagagagcagctgctcatggtggtgca 620
Query: 421 cacaggtaaacccacagctgggcttcagagatggga 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacaggtaaacccacagctgggcttcagagatggga 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_a18.g1 MSMg01no057_a18.g1 CHROMAT_FILE:
MSMg01no057_a18.g1 PHD_FILE: MSMg01no057_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:52 2005
(295 letters)
>mm_chr9_62800072_62800766
Length = 695
Score = 571 bits (295), Expect = e-167
Identities = 295/295 (100%)
Strand = Plus / Minus
Query: 1 ctgatggcttaaatgagaagtgcaagctttagcatctgatgagactgccagcttgctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctgatggcttaaatgagaagtgcaagctttagcatctgatgagactgccagcttgctgta 436
Query: 61 tagaaggaaagactaagaggtaagccacaggaagagagcaactgtccttgaattccagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tagaaggaaagactaagaggtaagccacaggaagagagcaactgtccttgaattccagag 376
Query: 121 ttagtatagagcagtacttgatgatgtgactggttttgaggtggggtgtctgtctggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttagtatagagcagtacttgatgatgtgactggttttgaggtggggtgtctgtctggctt 316
Query: 181 taatataattaatgggtttttccccagaaggtgggcacgttactctctttgccatccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 taatataattaatgggtttttccccagaaggtgggcacgttactctctttgccatccaca 256
Query: 241 gtctgtgcttctattattattaagtgagaattattaagtgcttattgatattgtt 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtctgtgcttctattattattaagtgagaattattaagtgcttattgatattgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
