XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGGAATTCA
GACATCACTTTGTCTCAGTCTCTTCTCATAGAATCTATGAATAACACTAT
ATGTTATCATTAAGGGTCATGGTGTTTGTAGACTGAAATGCTATAGGTAG
AGTACTTTAAACAGCAACTGGAGTTAATTTGTGTATTATTACTGATATGA
ATGTGGAGCATATATCTCTGTTTACTAATTATAATTGTAAAGCTTTTCCC
CCACCAATAGAACATGTACTCATTCTTCTTATTTTATTTTATATTAATTG
GATACTTTATTTATTTACATTTCAATGTTATCCCTTTTCCTGGTTTCCCC
TCTGGAAATCACCTACCACAACCCACTTACCTGCTTCTATGAGGGTATTC
CCATACCCAACCACTGACTCCCACTTAGCCCTAGCATTCCTCTATCCAGG
GACATCAAGTCTTCACAGTATCAAGGGCCTACCCTCCAACTGATGCCAGA
TAAGGCCCTTTAAGTTCATTCAGTCATTCCCTAACTTGTACATTGGGGTC
CCTGTTCTCAGTCCAATGGTTGGCTTTGAGGCCCCACATCATTATTAGTT
AGGAACGGGCAGAGCCTCTCAGAAGACAGCTGTGTCAGGCTTCTGTCAGC
AAGCAATTCTTGACATCCACAATAGTGTCTGGGTTTGGCGCTTGCATGTG
ACAA

CCCTTCCATACTNCTTTGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTTTAGTCA
ATTTTAGAAAGTCTTTAATTTCACTCTTAATGTCTGTCTTAACACATTTT
TTTATTCAATAAAAAGCTGTCCAGTTTCCATGAGTTTGCAACATTTCTGT
TGTTTCTGTTTTGCTGTTGTTGTTGTTTGGTTTTGTTTTTTGCTTGGCTT
TCCATCNCCCCCCACCCAAAACCTCTCCCCTCCCCCACCCCCTCTCTCCC
ACTACTTATTTTTTCTTTTTTACAACACTAATTTTTTTTTCTCATCTCAC
CCTCCTCCCTCCCCCCTTCCCCATCCATTTTTTTTTTTTCTATTCCATTC
ACATCCCTTCTCCTCCCCCCCCCTCCCCTTCCCCCCCCCCCTCTTTTTCT
CCCTTCCCCCCCTTTCCCTCAAAATTATTTCCCCCCCCCTTTCCCCTCTC
AACACATTCAAACCTCTCAAACCTTATCAACTTCATCTCCACCCCCCCCT
CTCCCCACCTTCCCACCCCTCCTTTACACCTTCCCCACCCACCCCACCCT
TCCCCAACACTCCAATTTCACCATTTTACCTCCTCTCCACCACTAACCCA
TCCCACTTCCAAACTTTTTTCCTTCTCTTCTCCCTTTCCCCCTTATCCCC
CCTACTCTTCCACCTATTCCTCCCCCCCCCCTCCCCATCCCTTATTCTCT
CTTTTTTCCTACATACCACACCTCACATTACCTCCCCTTACATCCTCATA
CCATCCATCTATCTTATCACTTTAN

Query= MSMg01no060_d11.b1 MSMg01no060_d11.b1 CHROMAT_FILE:
MSMg01no060_d11.b1 PHD_FILE: MSMg01no060_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:54 2005
         (639 letters)



>mm_chr9_11031977_11033015
          Length = 1039

 Score = 1168 bits (604), Expect = 0.0
 Identities = 625/632 (98%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 9   gaattcagacatcactttgtctcagtctcttctcatagaatctatgaataacactatatg 68
           |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 209 gaattcagacatcattttgtctcagtctcttctcatagaatctataaataacactatatg 268

                                                                       
Query: 69  ttatcattaagggtcatggtgtttgtagactgaaatgctataggtagagtactttaaaca 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttatcattaagggtcatggtgtttgtagactgaaatgctataggtagagtactttaaaca 328

                                                                       
Query: 129 gcaactggagttaatttgtgtattattactgatatgaatgtggagcatatatctctgttt 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcaactggagttaatttgtgtattattactgatatgaatgtggagcatatatctctgttt 388

                                                                       
Query: 189 actaattataattgtaaagcttttcccccaccaatagaacatgtactcattcttcttatt 248
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 389 actaattataattgtaaagcttttcccccatcaatagaacatgtactcattctttttatt 448

                                                                       
Query: 249 ttattttatattaattggatactttatttatttacatttcaatgttatcccttttcctgg 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttattttatattaattggatactttatttatttacatttcaatgttatcccttttcctgg 508

                                                                       
Query: 309 tttcccctctggaaatcacctaccacaacccacttacctgcttctatgagggtattccca 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tttcccctctggaaatcacctaccacaacccacttacctgcttctatgagggtattccca 568

                                                                       
Query: 369 tacccaaccactgactcccacttagccctagcattcctctatccagggacatcaagtctt 428
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tacccaaccactgactcccacatagccctagcattcctctatccagggacatcaagtctt 628

                                                                       
Query: 429 cacagtatcaagggcctaccctccaactg-atgccagataaggccctttaagttcattca 487
           |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 629 cacagtatcaagggcctaccctccaa-tggatgccagataaggccctttaagttcattca 687

                                                                       
Query: 488 gtcattccctaacttgtacattggggtccctgttctcagtccaatggttggctttgaggc 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtcattccctaacttgtacattggggtccctgttctcagtccaatggttggctttgaggc 747

                                                                       
Query: 548 cccacatcattattagttaggaacgggcagagcctctcagaagacagctgtgtcaggctt 607
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 cccacatcattattagttaggaacgggcagagcctctcagaagacagctgtgtcaggctt 807

                                           
Query: 608 ctgtcagcaagcaattcttgacatccacaata 639
           ||||||||||||||||||||||||||||||||
Sbjct: 808 ctgtcagcaagcaattcttgacatccacaata 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)