Query= MSMg01no060_o21.b1 MSMg01no060_o21.b1 CHROMAT_FILE:
MSMg01no060_o21.b1 PHD_FILE: MSMg01no060_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:46 2005
(631 letters)
>mm_chr9_89951716_89952746
Length = 1031
Score = 1166 bits (603), Expect = 0.0
Identities = 624/631 (98%), Gaps = 1/631 (0%)
Strand = Plus / Plus
Query: 1 tagttagccagatgctgttctaaatacacattcagaagatacatttccactcaagtttta 60
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 201 tagttagccagatgctgttctaaacacacattcagaagatacatttccacccaagtttta 260
Query: 61 cttctgtaggtttaacaatgacttttcatagagtaaaatgtatttggggaaaaaaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctgtaggtttaacaatgacttttcatagagtaaaatgtatttggggaaaaaaatcaa 320
Query: 121 ggtcttcataataattttgactattgcttaatctagaataattttataatgattaggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtcttcataataattttgactattgcttaatctagaataattttataatgattaggaag 380
Query: 181 caaagatgattttaattgaacttttgtgttgcagaaaaggagatagggtaatttaatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagatgattttaattgaacttttgtgttgcagaaaaggagatagggtaatttaatata 440
Query: 241 agtattctttcttaggctaaacttgtgtgagacagaaaggcaggtgttcaaggagaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtattctttcttaggctaaacttgtgtgagacagaaaggcaggtgttcaaggagaagaa 500
Query: 301 aatatataaaatattcaactctttttttttaatttattttttttatcacccattttcctc 360
||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||
Sbjct: 501 aatatataaaatattcaactctttttttt-aatttattttttttattacatattttcctc 559
Query: 361 aattacatttccaatgctatcccaaaagtctcccataccctcccccccacttccctaccc 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 aattacatttccaatgctatcccaaaagtcccccataccctcccccccacttccctaccc 619
Query: 421 actcattcccattttttttggccctggcgttcccctgtactggggcatatacagtttgcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 actcattcccattttttttggccctggcgttcccctgtactggggcatatacagtttgcg 679
Query: 481 tgtccaatgggcctctctttccagtgatggccgactaggccatcttttgatacatatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtccaatgggcctctctttccagtgatggccgactaggccatcttttgatacatatgca 739
Query: 541 gctagagtcaagagctccggggtactggttagttcataatgttgttccacctatagggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gctagagtcaagagctccggggtactggttagttcataatgttgttccacctatagggtt 799
Query: 601 gcagatccctttagctccttgggtactttct 631
|||||||||||||||||||||||||||||||
Sbjct: 800 gcagatccctttagctccttgggtactttct 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_o21.g1 MSMg01no060_o21.g1 CHROMAT_FILE:
MSMg01no060_o21.g1 PHD_FILE: MSMg01no060_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:46 2005
(618 letters)
>mm_chr9_90084688_90085705
Length = 1018
Score = 629 bits (325), Expect = 0.0
Identities = 343/349 (98%)
Strand = Plus / Minus
Query: 1 tctttttccattaagcaaccctgttcttgggtgtgcccagcactactccatgacataaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tctttttccattaagcaaccctgttcttgggtgtgcccagcactactccatgacataaga 604
Query: 61 cactgttgttagacccactttacagatgaggtaatgaagcactgaggtaggttagttgtt 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 603 cactgttgttagacccactttacagatgaggaaatgaagcactgaggtaggttagttgtt 544
Query: 121 ctgcatagggctcctatggggatacaagtcagccctaggaagaaatgcaaactgtggagc 180
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ccgcatagggctcctgtggggatacaagtcagccctaggaagaaatgcaaactgtggagc 484
Query: 181 ccagcagtatagcctcacagcctacctgccttacatgggcaggctgtaccacaagcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ccagcagtatagcctcacagcctacctgccttacatgggcaggctgtaccacaagcttgc 424
Query: 241 ctctagctgggattctcctcacccaatctctggagtcattcatcattaggctcattctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctctagctgggattctcctcacccaatctctggagtcattcatcattaggctcattctcc 364
Query: 301 acgtcctatgagaagccttccctgacttccctgactcccccgacttccc 349
||||||||||||||||||||||||| |||||||||| ||| ||||||||
Sbjct: 363 acgtcctatgagaagccttccctgatttccctgacttccctgacttccc 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
