Query= MSMg01no062_d06.b1 MSMg01no062_d06.b1 CHROMAT_FILE:
MSMg01no062_d06.b1 PHD_FILE: MSMg01no062_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:33 2005
(212 letters)
>mm_chr9_51231474_51232085
Length = 612
Score = 395 bits (204), Expect = e-114
Identities = 210/212 (99%)
Strand = Plus / Minus
Query: 1 ccccggggcaaaatttcctaagaaatttgatttaaaagaaaaatatctggtcatttgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ccccggggcaaaatttcctaagaaatttgatttaaaagaaaaatatctggtcatttgggg 353
Query: 61 acaccatctataaaattgtatttctaattcagaaagaagacgcggaggatggtatgcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 acaccatctataaaattgtatttctaattcagaaagaagacgcggaggatggtatgcact 293
Query: 121 gctaaccatggtaagcaagctgttcagtccccatggcataaagtctgactttttttcctt 180
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 292 gctaaccatggtaagcaatctgttcagtccccgtggcataaagtctgactttttttcctt 233
Query: 181 ctatctgcttttatgcttaaaggaattaaaat 212
||||||||||||||||||||||||||||||||
Sbjct: 232 ctatctgcttttatgcttaaaggaattaaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no062_d06.g1 MSMg01no062_d06.g1 CHROMAT_FILE:
MSMg01no062_d06.g1 PHD_FILE: MSMg01no062_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:33 2005
(142 letters)
>mm_chr9_51167217_51167757
Length = 541
Score = 244 bits (126), Expect = 2e-69
Identities = 138/142 (97%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 1 gtgtttcttgtgttaggggtttcattcctttgaggtcctttccagctttccagttctagc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgtttcttgtgtttggggtttcattcctttgaggtcctttccagctttccagttctagc 260
Query: 61 attttagtatttaacccataaaggatgaaatcccactttaatacaaaggtgaattgtgtc 120
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 261 attttagtatttaacccataaagga-gaaatcccactttaatagaaaggtgaattgtgtc 319
Query: 121 acttatctgtgtcctttgtgcc 142
||||| ||||||||||||||||
Sbjct: 320 acttagctgtgtcctttgtgcc 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 142
Length of database: 541
Length adjustment: 8
Effective length of query: 134
Effective length of database: 533
Effective search space: 71422
Effective search space used: 71422
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
