Query= MSMg01no062_i09.b1 MSMg01no062_i09.b1 CHROMAT_FILE:
MSMg01no062_i09.b1 PHD_FILE: MSMg01no062_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:12 2005
(764 letters)
>mm_chr9_113235020_113236183
Length = 1164
Score = 1054 bits (545), Expect = 0.0
Identities = 572/581 (98%), Gaps = 1/581 (0%)
Strand = Plus / Minus
Query: 1 tctaatctcaggcctttcttgtttgtgatgcccctaagaatgcagtggctaggctccgtg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 581 tctaatctcaggcctttcttgtttgtgatgtggctaagaatgcagtggctaggctccgtg 522
Query: 61 tgcaggcattttgtcagccagtgtgaggggagagccttccttcctgcaggatagacatac 120
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 521 tgcaggcattttgtcatccagtgtgaggggaaagccttccttcctgcaggatagacatac 462
Query: 121 tggagactcagaggagcaccccagaaagcagcattcctcacggtggcaaccaaccagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tggagactcagaggagcaccccagaaagcagcattcctcacggtggcaaccaaccagcct 402
Query: 181 acatctggatattgcactgtaacctgaactcaccttcactgagcagagcaagtcacttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 acatctggatattgcactgtaacctgaactcaccttcactgagcagagcaagtcacttga 342
Query: 241 ctcagactgctcttgagaagcagagcagccctcctgttctggcagggtctgaagtcagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctcagactgctcttgagaagcagagcagccctcctgttctggcagggtctgaagtcagga 282
Query: 301 gctgggagatggtgctgttacttgcttgtgcaagtggggagcagactgccactttccaga 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 281 gctgggagatggtgctgttacttgcttgtgcaagtggggaccagactgccactttccaga 222
Query: 361 gcccataaaagttgggaaggcagctgggcgtggtggcacacgcctttaatcccagcactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gcccataaaagttgggaaggcagctgggcgtggtggcacacgcctttaatcccagcactc 162
Query: 421 gggaggcagaggcaggcagatttctgagttcgaggccagcttggtctacaaagtgagttc 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gggaggcagaggcaggcaggtttctgagttcgaggccagcttggtctacaaagtgagttc 102
Query: 481 caggacagccagagctacacagaaaaaccctgtctcgaaaaaa-caaaaccaaccaacca 539
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 101 caggacagccagagctacacagaaaaaccctgtctcgaaaaaaacaaaaccaaccaacca 42
Query: 540 accaaccaaccaaaaaggttgggaaagcatatgtgggggac 580
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 41 accaaccaaccaaaaaggttgggaaggcatatgtgggggac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 764
Length of database: 1164
Length adjustment: 10
Effective length of query: 754
Effective length of database: 1154
Effective search space: 870116
Effective search space used: 870116
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no062_i09.g1 MSMg01no062_i09.g1 CHROMAT_FILE:
MSMg01no062_i09.g1 PHD_FILE: MSMg01no062_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:12 2005
(723 letters)
>mm_chr9_113133233_113134355
Length = 1123
Score = 1353 bits (700), Expect = 0.0
Identities = 717/723 (99%)
Strand = Plus / Plus
Query: 1 gagagtggactcgtcagagaacactgacttaccttgtttcagttgctgacgttggcagtc 60
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 gagagtggactcgtcagaggacactgacttaccttgtttcagttgctgaggttggcagtc 260
Query: 61 tccctctgacctgtggagactgacagggatgagaatctaagaggagggagaagccacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccctctgacctgtggagactgacagggatgagaatctaagaggagggagaagccacatc 320
Query: 121 ttcccagtgaggaagaaacactgacagagagtaaaatgaccttgttcttctgattagtac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ttcccagtgaggaagaaacactgacagagagtaaaatgaccttgttcttctgattagtgc 380
Query: 181 ttattttattttattaatttattcattttattttgatctcagtttcctatttttattttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttattttattttattaatttattcattttattttgatctcagtttcctatttttattttg 440
Query: 241 tattttattactattgataactttgttctttgattgctttattgttgtattttgacttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattttattactattgataactttgttctttgattgctttattgttgtattttgacttga 500
Query: 301 atcttgatgaaagaaaaatatctgatgattgtgctagtgaattttaatgtcaatttgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcttgatgaaagaaaaatatctgatgattgtgctagtgaattttaatgtcaatttgaca 560
Query: 361 caagctggagtcatctgggaagactcaactgaggaagtgccggtcagatgtgccaagtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caagctggagtcatctgggaagactcaactgaggaagtgccggtcagatgtgccaagtct 620
Query: 421 tagggcattgttttgattaatgatagttgtgagaaggacaggctcactatgggtggttct 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagggcattgtttcgattaatgatagttgtgagaaggacaggctcactatgggtggttct 680
Query: 481 ccacttgggcaggtgaccctagaatgtatgaagtacggtagctgagtgagtcacagaagc 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccactcgggcaggtgaccctagaatgtatgaagtacggtagctgagtgagtcacagaagc 740
Query: 541 aatccagtaagcagtaagtaacccctccatgccttcaggttcccacctctagttcctgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatccagtaagcagtaagtaacccctccatgccttcaggttcccacctctagttcctgcc 800
Query: 601 ctgacctccctcattgatggattgtgaccagagaggctgtattagttagggttttattgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgacctccctcattgatggattgtgaccagagaggctgtattagttagggttttattgt 860
Query: 661 tgtgaagaggcactatgaccacagcaactctcacaaagganagcatttcattggggctgg 720
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 861 tgtgaagaggcactatgaccacagcaactctcacaaaggaaagcatttcattggggctgg 920
Query: 721 ctt 723
|||
Sbjct: 921 ctt 923
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 723
Length of database: 1123
Length adjustment: 10
Effective length of query: 713
Effective length of database: 1113
Effective search space: 793569
Effective search space used: 793569
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
