MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-063A13
Chromosome	9 (Build37)
Map Location	64,505,896 - 64,506,377
singlet/doublet	singlet
Overlap gene	Megf11
Upstream gene	Smad3, LOC100040009, Smad6, 2600006L11Rik, Lctl, Zwilch, Rpl4, Snapc5, Map2k1, Uchl4, Tipin, Dis3l
Downstream gene	Rab11a, AI115600, F730015K02Rik, Slc24a1, 2010321M09Rik, Ptplad1, Dpp8, Nope, Punc, Parp16, Cilp, Clpx, Pdcd7, Gm514, 5430433E21Rik, Rasl12, Ostb, Mtfmt, Spg21, Ankdd1a, Plekhq1, Pif1, LOC100041121, Rbpms2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Smad3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17127 MGI:1201674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040009 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040009
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Smad6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17130 MGI:1336883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2600006L11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76814 MGI:1924064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Lctl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235435 MGI:2183549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zwilch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68014 MGI:1915264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67891 MGI:1915141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snapc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330959 MGI:1914282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map2k1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26395 MGI:1346866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uchl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93841 MGI:1890440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tipin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66131 MGI:1921571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dis3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213550 MGI:2143272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Megf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214058 MGI:1920951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab11a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53869 MGI:1858202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI115600 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102442 MGI:2142979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 76 ESTs, 2 Proteins

name	F730015K02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319526 MGI:2442199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Slc24a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214111 MGI:2384871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010321M09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69882 MGI:1917132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ptplad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57874 MGI:1889341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dpp8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74388 MGI:1921638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nope (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56741 MGI:1858497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Punc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19289 MGI:1202390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Parp16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214424 MGI:2446133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cilp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214425 MGI:2444507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clpx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270166 MGI:1346017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pdcd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50996 MGI:1859170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm514 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208080 MGI:2685360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs

name	5430433E21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74492 MGI:1921742
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 2 Proteins

name	Rasl12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70784 MGI:1918034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ostb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330962 MGI:3582052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtfmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69606 MGI:1916856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spg21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27965 MGI:106403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankdd1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384945 MGI:2686319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Plekhq1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102595 MGI:2143132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pif1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208084 MGI:2143057
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041121 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041121
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Rbpms2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71973 MGI:1919223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801800 GeneID:17127 MGI:1201674
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 3 (Drosophila) transcript_id : NM_016769.3

name	Smad6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560672 GeneID:17130 MGI:1336883
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 6 (Drosophila) transcript_id : NM_008542.2

name	2600006L11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260001 GeneID:76814 MGI:1924064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2600006L11 gene transcript_id : XM_001473989.1

name	Lctl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802015 GeneID:235435 MGI:2183549
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactase-like transcript_id : NM_145835.2

name	Zwilch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71143133 GeneID:68014 MGI:1915264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Zwilch, kinetochore associated, homolog (Drosophila) transcript_id : NM_026507.3

name	Rpl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374582 GeneID:67891 MGI:1915141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L4 transcript_id : NM_024212.3

name	Snapc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113681193 GeneID:330959 MGI:1914282
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small nuclear RNA activating complex, polypeptide 5 transcript_id : NM_183316.2

name	Map2k1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372689 GeneID:26395 MGI:1346866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase 1 transcript_id : NM_008927.3

name	Uchl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15809025 GeneID:93841 MGI:1890440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin carboxyl-terminal esterase L4 transcript_id : NM_033607.1

name	Tipin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385283 GeneID:66131 MGI:1921571
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : timeless interacting protein transcript_id : NM_025372.2

name	Dis3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47604967 GeneID:213550 MGI:2143272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DIS3 mitotic control homolog (S. cerevisiae)-like transcript_id : NM_001001295.1

name	Dis3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130012 GeneID:213550 MGI:2143272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DIS3 mitotic control homolog (S. cerevisiae)-like transcript_id : NM_172519.2

name	Megf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362961 GeneID:214058 MGI:1920951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : multiple EGF-like-domains 11 transcript_id : NM_172522.2

name	Rab11a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373351 GeneID:53869 MGI:1858202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB11a, member RAS oncogene family transcript_id : NM_017382.4

name	AI115600 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260033 GeneID:102442 MGI:2142979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 76 ESTs, 2 Proteins product : expressed sequence AI115600 transcript_id : XM_001476259.1

name	F730015K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260035 GeneID:319526 MGI:2442199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA F730015K02 gene transcript_id : XM_001487795.1

name	Slc24a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450182 GeneID:214111 MGI:2384871
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 transcript_id : NM_144813.1

name	2010321M09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647252 GeneID:69882 MGI:1917132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010321M09 gene transcript_id : NM_001077631.1

name	2010321M09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647250 GeneID:69882 MGI:1917132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010321M09 gene transcript_id : NM_175153.3

name	Ptplad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28916662 GeneID:57874 MGI:1889341
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase-like A domain containing 1 transcript_id : NM_021345.1

name	Dpp8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542570 GeneID:74388 MGI:1921638
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dipeptidylpeptidase 8 transcript_id : NM_028906.2

name	Nope (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910463 GeneID:56741 MGI:1858497
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neighbor of Punc E11 transcript_id : NM_020043.1

name	Punc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892646 GeneID:19289 MGI:1202390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : putative neuronal cell adhesion molecule transcript_id : NM_008988.2

name	Parp16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328418 GeneID:214424 MGI:2446133
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly (ADP-ribose) polymerase family, member 16 transcript_id : NM_177460.3

name	Cilp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373302 GeneID:214425 MGI:2444507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cartilage intermediate layer protein, nucleotide pyrophosphohydrolase transcript_id : NM_173385.2

name	Clpx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113205070 GeneID:270166 MGI:1346017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caseinolytic peptidase X (E.coli) transcript_id : NM_011802.2

name	Clpx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113205068 GeneID:270166 MGI:1346017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caseinolytic peptidase X (E.coli) transcript_id : NM_001044389.1

name	Pdcd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7710019 GeneID:50996 MGI:1859170
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death protein 7 transcript_id : NM_016688.1

name	Gm514 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386174 GeneID:208080 MGI:2685360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs product : gene model 514, (NCBI) transcript_id : XM_146931.5

name	5430433E21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386175 GeneID:74492 MGI:1921742
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 2 Proteins product : RIKEN cDNA 5430433E21 gene transcript_id : XM_134954.7

name	Rasl12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677525 GeneID:70784 MGI:1918034
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS-like, family 12 transcript_id : NM_001033158.1

name	Ostb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341457 GeneID:330962 MGI:3582052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : organic solute transporter beta transcript_id : NM_178933.2

name	Mtfmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802994 GeneID:69606 MGI:1916856
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial methionyl-tRNA formyltransferase transcript_id : NM_027134.2

name	Spg21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88900518 GeneID:27965 MGI:106403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spastic paraplegia 21 homolog (human) transcript_id : NM_138584.2

name	Ankdd1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260003 GeneID:384945 MGI:2686319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : ankyrin repeat and death domain containing 1A transcript_id : XM_357954.6

name	Plekhq1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986535 GeneID:102595 MGI:2143132
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family Q member 1 transcript_id : NM_153119.2

name	Pif1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801689 GeneID:208084 MGI:2143057
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) transcript_id : NM_172453.2

name	LOC100041121 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260046 GeneID:100041121
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Sec61-complex gamma-subunit transcript_id : XM_001476757.1

name	Rbpms2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130420 GeneID:71973 MGI:1919223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding protein with multiple splicing 2 transcript_id : NM_028030.3

name	Smad3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543222 CCDS:CCDS23272.1 GeneID:17127 MGI:1201674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003690 - double-stranded DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0001707 - mesoderm formation [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0048340 - paraxial mesoderm morphogenesis [Evidence IMP]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0051098 - regulation of binding [Evidence IDA]; GO:0050678 - regulation of epithelial cell proliferation [Evidence IMP]; GO:0050776 - regulation of immune response [Evidence IMP]; GO:0016202 - regulation of striated muscle development [Evidence IDA]; GO:0017015 - regulation of transforming growth factor beta receptor signaling pathway [Evidence IDA]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0042110 - T cell activation [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Smad 3 product : MAD homolog 3 protein_id : NP_058049.2

name	Smad6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560673 CCDS:CCDS23273.1 GeneID:17130 MGI:1336883
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_process : GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Smad 6 product : MAD homolog 6 protein_id : NP_032568.2

name	2600006L11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260002 GeneID:76814 MGI:1924064
definition	codon_start : 1 product : hypothetical protein LOC76814 protein_id : XP_001474039.1

name	Lctl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003882 CCDS:CCDS23274.1 GeneID:235435 MGI:2183549
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA] codon_start : 1 note : Klotho-LPH related product : lactase-like protein_id : NP_665834.1

name	Zwilch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532956 CCDS:CCDS23275.1 GeneID:68014 MGI:1915264
definition	GO_component : GO:0000776 - kinetochore [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : Zwilch protein_id : NP_080783.2

name	Rpl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794450 GeneID:67891 MGI:1915141
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : ribosomal protein L4 protein_id : NP_077174.1

name	Snapc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113681194 CCDS:CCDS23276.1 GeneID:330959 MGI:1914282
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : small nuclear RNA activating complex, polypeptide 5, 19kDa product : small nuclear RNA activating complex, polypeptide 5 protein_id : NP_899139.2

name	Map2k1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678794 CCDS:CCDS23277.1 GeneID:26395 MGI:1346866
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004708 - MAP kinase kinase activity [Evidence IMP]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030216 - keratinocyte differentiation [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase, mitogen activated, kinase 1, p45; MAP kinase kinase 1 product : mitogen activated protein kinase kinase 1 protein_id : NP_032953.1

name	Uchl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809026 CCDS:CCDS23278.1 GeneID:93841 MGI:1890440
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin carboxyl-terminal esterase L4 protein_id : NP_291085.1

name	Tipin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313608 CCDS:CCDS23279.1 GeneID:66131 MGI:1921571
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : timeless-interacting protein protein_id : NP_079648.1

name	Dis3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47604968 CCDS:CCDS23280.1 GeneID:213550 MGI:2143272
definition	GO_function : GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : DIS3 mitotic control homolog (S. cerevisiae)-like protein_id : NP_001001295.1

name	Dis3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369724 CCDS:CCDS23280.1 GeneID:213550 MGI:2143272
definition	GO_function : GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : DIS3 mitotic control homolog (S. cerevisiae)-like protein_id : NP_766107.1

name	Megf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369722 CCDS:CCDS23281.1 GeneID:214058 MGI:1920951
definition	codon_start : 1 product : MEGF11 protein protein_id : NP_766110.1

name	Rab11a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980840 CCDS:CCDS23282.1 GeneID:53869 MGI:1858202
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0005802 - Golgi trans face [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0019905 - syntaxin binding [Evidence ISS] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0048227 - plasma membrane to endosome transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB11a, member RAS oncogene family protein_id : NP_059078.2

name	F730015K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260036 GeneID:319526 MGI:2442199
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001487845.1

name	AI115600 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260034 GeneID:102442 MGI:2142979
definition	codon_start : 1 product : hypothetical protein LOC102442 protein_id : XP_001476309.1

name	Slc24a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450183 CCDS:CCDS23283.1 GeneID:214111 MGI:2384871
definition	codon_start : 1 product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 protein_id : NP_659062.1

name	2010321M09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647253 GeneID:69882 MGI:1917132
definition	GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69882 protein_id : NP_001071099.1

name	2010321M09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647251 GeneID:69882 MGI:1917132
definition	GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69882 protein_id : NP_780362.2

name	Ptplad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28916663 CCDS:CCDS23284.1 GeneID:57874 MGI:1889341
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007249 - I-kappaB kinase/NF-kappaB cascade [Evidence IDA]; GO:0007254 - JNK cascade [Evidence IDA]; GO:0007266 - Rho protein signal transduction [Evidence IDA] codon_start : 1 exception : mismatches in translation product : butyrate-induced transcript 1 protein_id : NP_067320.1

name	Dpp8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542571 CCDS:CCDS23285.1 GeneID:74388 MGI:1921638
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004274 - dipeptidyl-peptidase IV activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : dipeptidylpeptidase 8 protein_id : NP_083182.2

name	Nope (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910464 GeneID:56741 MGI:1858497
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : amplimer WI-18508, mouse homolog product : neighbor of Punc e11 protein protein_id : NP_064427.1

name	Punc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679571 GeneID:19289 MGI:1202390
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : amplimer WI-14920, mouse homolog product : putative neuronal cell adhesion molecule protein_id : NP_033014.1

name	Parp16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328419 CCDS:CCDS23286.1 GeneID:214424 MGI:2446133
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003950 - NAD+ ADP-ribosyltransferase activity [Evidence IEA] GO_process : GO:0006471 - protein amino acid ADP-ribosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : poly (ADP-ribose) polymerase family, member 16 protein_id : NP_803411.2

name	Cilp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734196 CCDS:CCDS23287.1 GeneID:214425 MGI:2444507
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cartilage intermediate layer protein, nucleotide pyrophosphohydrolase protein_id : NP_775561.1

name	Clpx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113205071 CCDS:CCDS23288.1 GeneID:270166 MGI:1346017
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; caseinolytic protease X product : caseinolytic protease X isoform 1 protein_id : NP_035932.2

name	Clpx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113205069 GeneID:270166 MGI:1346017
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; caseinolytic protease X product : caseinolytic protease X isoform 2 protein_id : NP_001037854.1

name	Pdcd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710020 GeneID:50996 MGI:1859170
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] codon_start : 1 exception : unclassified translation discrepancy product : programmed cell death protein 7 protein_id : NP_057897.1

name	Gm514 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51764923 GeneID:208080 MGI:2685360
definition	codon_start : 1 product : hypothetical protein protein_id : XP_146931.3

name	5430433E21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38089943 GeneID:74492 MGI:1921742
definition	codon_start : 1 product : hypothetical protein LOC74492 protein_id : XP_134954.2

name	Rasl12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677526 CCDS:CCDS23290.1 GeneID:70784 MGI:1918034
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAS-like, family 12 protein_id : NP_001028330.1

name	Ostb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725804 CCDS:CCDS23291.1 GeneID:330962 MGI:3582052
definition	GO_component : GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005215 - transporter activity [Evidence IPI] GO_process : GO:0006810 - transport [Evidence IPI] codon_start : 1 note : Ost beta product : organic solute transporter beta protein_id : NP_849264.1

name	Mtfmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312348 CCDS:CCDS23292.1 GeneID:69606 MGI:1916856
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]; GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial methionyl-tRNA formyltransferase protein_id : NP_081410.1

name	Spg21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070390 CCDS:CCDS23293.1 GeneID:27965 MGI:106403
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0030140 - trans-Golgi network transport vesicle [Evidence ISS] GO_function : GO:0042609 - CD4 receptor binding [Evidence ISS] GO_process : GO:0050851 - antigen receptor-mediated signaling pathway [Evidence ISS] codon_start : 1 product : spastic paraplegia 21 homolog protein_id : NP_613050.1

name	Ankdd1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260004 GeneID:384945 MGI:2686319
definition	codon_start : 1 product : similar to ankyrin repeat and death domain containing 1A protein_id : XP_357954.6

name	Plekhq1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24025665 CCDS:CCDS23294.1 GeneID:102595 MGI:2143132
definition	codon_start : 1 product : PH domain-containing protein homolog protein_id : NP_694759.1

name	Pif1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369615 CCDS:CCDS23295.1 GeneID:208084 MGI:2143057
definition	GO_function : GO:0004386 - helicase activity [Evidence IEA] codon_start : 1 note : DNA helicase-like protein; Pif1/Rrm3 DNA helicase-like protein product : PIF1 homolog protein_id : NP_766041.1

name	LOC100041121 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260047 GeneID:100041121
definition	codon_start : 1 product : similar to Sec61-complex gamma-subunit protein_id : XP_001476807.1

name	Rbpms2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980694 CCDS:CCDS23296.1 GeneID:71973 MGI:1919223
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding protein with multiple splicing 2 protein_id : NP_082306.2

name	LOC100040009 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040009
definition	number : 3 pseudo : _no_value

name	LOC100040009 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040009
definition	number : 2 pseudo : _no_value

name	LOC100040009 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040009
definition	number : 1 pseudo : _no_value

clone name	MSMg01-526G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440C10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-393A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-375G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115H12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-063A13.T7 (MSMg01no063_a13.b1)	MSMg01-063A13.TJ (MSMg01no063_a13.g1)
ACC	AG288868	AG288869
length	769	1,259
length of high quality (start - end)	490 (130 - 619)	---
definition	CHROMAT_FILE: MSMg01no063_a13.b1 PHD_FILE: MSMg01no063_a13.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:07:14 2005	CHROMAT_FILE: MSMg01no063_a13.g1 PHD_FILE: MSMg01no063_a13.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:07:14 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNGGGGTAGTNNNNCTATCTATAAXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGGAGCCACG ATGGCAGATTACCTTTGAAAGATTTGATTTAGCCAGCAGATGCCACAGAG ATAGAAATCTCATCAGGGCAAAAGAAAGGCAGAAAAACCCACCCCTCGAA GCCACTGCCGCATTGTGCAGCTTTCGGCTCCTGTTAGCTAGTGATTAATC TGTGTCTGGGGAAAAGGAAGAAAGGGGCAAACCTGATAACAGAGGAGGCA GCCTGTGCATCAGTGATGGGGACTTTGGTCCAAGCCTCCCCTGGCACTGC CTGAACAGCCAGGTCACCCAGGGGAAGCGAGGCCTTTGCAGGCAGAATAA CTGCCATGAGTTCAAAGACAGCTGGTCTCAAAAAAAAAAAAAAAAAAGCA TAAATGAAAAAAATCAAATCATTGTCTGCCATCACTCTGCAGCATCTTTC CAAAGGGGAATTTAAACTAAGAAGTTAGATGTCCTGTTTCTAGAAATAGA ATTGTAGGGCTTGGGATATAGTTCAGCCTGCAGAGTTTGCCTAGAGTCTT AGTAACTGTTCTATTCCTATTCAGAGACACTGGGGACCCAGGACCAAGGC TACCTTAGAACTGATAGCATTCTGCTGTTGCTGTCTGCTGCTATTTTATC ACGAGATGTTTTCTCCATG	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCNNNCCCCAAATTN NNTTTNNNCNCCTTTNCNGGNNNNTNNTTNNNTTNNCCCGTNNNCNNCNN NTATNCCCGCATATANGCCCCGCCCCGNCCTTGTTATTCACCACTCCCGG CGCGTGCTTTACCTATCGCACTAGTTCGTGTCTCACCCGTGCATTCCGCT CTCTTCTTGCTTGTACGCTCTTATTTATGTGCCTCCCTCCCCCGTACTCG ACTCTCCTCTCTGCCTCTTGCTCGTCTTCGTATTGGATATGGCGTGACGG AGCGTATCTCGCGCTCACTCTGTCTTGCTATATACGTATACTCCTTCGCT CGCCACTCTGCGTTTATCGAAGTCCAACTGACGNATATATTATATAACAT ACTCCACGACGACAGTGCGGACACGCGGCTGGCTGGCAGTAGCATCTCTC GATCGTGTATACGACATCTATCACTCTAGGCGTCTGACATGGTTGTGTCG CCTGCATGATAGTAGATATGAGACGATATCACATTGACCCAATCTATCTC TACCTATCATATGCTCACCACGTCTATGTTGTCACAGCCATGTATATGTA TACGTATAACTACTGAGCGTGCGTGCCGACGAGTTGGAAATACTATTGAT CTGCGATCATCAGTCATATACCAGTCTTATCAATCGATGAGCATCGATAA GCTAGGCCGTCAGCCTGATGATTACGTATGACACACGGAGCAGAAGATAC TCGTTGGAAACGATACGCCGTACTACTGCAAGTAGCACGCATATGCGACA CCAGCGCGATCCGCGGCGATAATTATTCGTCCTCATCGAGAGTATAACTA ATACATTACAGTTATAGCTACTCTCNCAAGCGGCGTGGTGGAGCGGGCTA GCGTGATAGTGAGTTGGTTGCGCGCATACCGAGGAGCTATTGCTATTGTG ACTGCTCGCTGTTGATATATCTATTATCACTGTGTGATCACACGATGATC GTCTACTATTGACGCGGTCCACGGGGTATCCGCTGCTCCGTATAGCTCTT CTATTCAGCTCTATGACAAGAATGTGCGCTCACCAACGTAATAGTAAGAA TAAACGTGCCGCCGTGAGGCGGATGAATAAGATGCGAGTGTNATAGAGAC GATGANAGAATGTCGCGCGCCACTCGCGNCGTCGCCTGAAGCGGGTACAT AATTGTCGN
quality values	Open. Hide. 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 6 6 6 6 3 0 0 0 0 3 9 9 9 14 19 14 21 11 11 11 25 25 37 37 32 32 28 37 25 21 10 10 10 22 22 25 23 10 10 10 26 26 43 37 37 33 33 33 33 33 22 19 9 9 10 22 25 37 37 30 28 28 28 36 35 30 30 35 35 39 34 34 40 34 43 43 47 48 48 57 57 42 42 40 40 40 50 54 54 54 57 68 68 68 68 42 46 34 34 34 48 48 50 50 50 50 57 57 47 57 57 57 57 57 57 57 57 57 57 54 54 57 57 68 40 40 38 38 38 42 42 47 50 50 50 50 68 68 68 68 57 57 57 57 57 57 59 59 57 57 68 68 68 68 68 57 57 57 59 59 57 57 57 57 57 57 57 57 57 59 59 59 59 57 68 57 57 57 57 57 57 57 68 68 68 57 57 57 57 57 57 59 68 68 59 59 57 57 59 59 57 57 57 57 57 57 59 59 57 59 59 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 62 52 52 52 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 52 52 52 62 62 62 52 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 43 44 44 52 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 52 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 52 52 62 62 52 62 62 62 62 62 52 43 43 16 26 16 14 13 10 10 10 13 23 24 24 34 34 13 13 12 18 13 13 13 23 32 43 43 52 43 43 35 35 31 31 43 44 52 52 52 44 43 35 35 35 43 43 52 52 45 45 43 43 43 43 31 31 31 42 38 24 12 9 9 9 14 21 24 32 13 13 13 38 38 57 57 57 39 35 35 35 57 43 57 57 57 57 57 57 57 43 43 41 44 28 23 27 43 43 57 57 52 43 42 35 26 26 32 38 50 50 57 44 42 32 32 43 43 43 52 52 48 50 50 57 48 48 48 47 44 50 43 35 35 28 22 18 11 11 12 19 32 42 43 43 46 57 46 43 42 42 42 42 43 43 37 33 33 21 21 16 20 24 36 36 37 32 35 35 24 24 14 14 14 32 28 29 29 15 15 14 19 15 22 12 11 10 10 15 15 21 27 21 15 12 12 12 17 18 22 31 26 31 16 21 11 10 11 13 16 15 10 10 10 10 10 8 9 9 18 14 18 12 13 11 15 19 18 22 16 10 10 8 8 8 8 12 12 28 23 28 23 18 18 10 10 8 8 8 8 8 8 10 12 12 13 11 8 8 8 8 11 10 10 13 11 14 11 15 8 8 8 6 6 8 8 6 6 8 8 10 10 10 11 11 11 11 15 17 11 11 12 11 11 11 10 10 9 8 10 10 10 11 11 14 13 13 10 10 10 10 9 9 9 9 9 10 11 12 12 11 11 11 11 11 11 15 16 11 11 11 11	Open. Hide. 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 3 0 0 0 3 7 7 9 9 9 7 7 3 0 0 0 3 14 3 0 0 0 3 0 3 8 8 8 3 0 3 0 3 3 0 0 0 0 3 0 0 3 3 0 0 0 3 3 0 0 3 11 8 7 3 0 0 0 3 0 0 3 0 0 0 3 9 3 0 3 15 13 10 13 9 8 8 8 3 0 3 6 8 7 9 16 16 17 8 8 3 0 3 8 8 12 12 8 8 6 8 6 6 10 8 11 11 12 12 7 7 6 6 6 6 10 10 10 10 10 10 13 10 11 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 10 10 8 8 8 9 8 8 8 6 6 6 6 8 8 11 11 10 8 8 8 10 10 8 8 8 8 6 10 7 9 10 9 6 8 6 9 9 6 6 6 6 8 8 12 8 6 6 6 6 6 10 10 10 10 8 13 6 6 8 8 11 12 12 21 16 14 11 11 10 8 8 6 6 6 10 10 8 8 8 8 8 8 6 6 6 6 8 8 8 6 6 8 6 8 10 10 10 9 9 9 13 12 13 9 8 10 8 8 8 8 8 8 8 10 9 6 10 6 6 8 10 8 8 8 8 10 10 10 11 11 8 8 6 6 6 6 8 10 8 9 8 8 8 10 8 8 8 6 6 6 6 10 10 6 6 6 10 8 8 6 8 6 6 6 10 8 6 6 8 8 10 8 8 8 8 8 8 8 9 7 8 8 8 10 8 8 8 8 10 10 8 8 8 8 9 8 9 9 8 8 6 6 6 6 6 3 0 3 8 6 8 10 10 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 8 8 6 6 6 6 6 6 6 6 6 6 12 10 9 9 8 8 11 11 8 8 8 10 8 8 8 8 11 8 8 8 6 6 6 6 8 8 8 8 9 8 8 7 7 6 8 8 8 8 8 10 8 8 8 8 8 8 10 10 10 8 8 8 8 11 10 11 11 10 9 10 10 9 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 10 8 8 7 7 10 10 10 10 10 10 10 8 8 8 8 11 10 10 10 8 8 6 6 6 6 8 10 10 10 8 8 8 8 7 9 8 10 10 8 8 8 8 6 6 6 6 8 8 8 8 8 8 9 9 9 9 8 8 8 8 9 8 8 8 8 8 8 8 8 9 9 9 9 11 10 10 8 8 8 8 8 8 10 9 9 9 8 6 6 6 8 6 6 6 6 6 8 8 8 8 8 8 10 10 10 8 9 8 10 9 8 6 6 6 6 6 6 8 8 11 8 10 13 10 10 8 8 8 10 10 9 9 7 8 8 8 8 8 8 8 8 6 7 10 11 9 9 8 8 6 6 8 8 8 8 8 8 8 12 9 9 6 6 6 6 6 6 8 8 6 6 8 6 8 10 10 13 12 8 8 8 8 8 8 11 11 11 11 10 10 8 9 9 9 9 9 10 8 8 8 8 8 8 6 6 8 6 6 6 6 10 8 9 9 9 10 10 10 8 8 8 8 8 8 8 8 8 7 7 8 8 8 8 6 6 6 8 8 8 8 8 6 6 6 6 10 8 8 6 6 8 8 9 9 10 11 12 8 8 8 8 8 10 11 16 12 12 12 11 11 11 10 10 10 9 8 8 8 6 6 8 8 8 8 6 6 6 6 8 8 8 9 9 8 8 8 8 7 7 6 8 6 6 6 6 8 8 6 8 8 12 11 11 11 13 9 8 8 8 8 8 10 8 8 8 8 8 8 6 8 6 6 8 8 8 8 10 10 8 8 8 6 6 8 8 10 10 8 8 8 8 8 10 10 11 11 10 10 10 8 8 8 8 8 6 6 6 6 6 8 8 10 10 11 10 8 8 3 0 3 8 8 8 6 7 6 7 7 6 6 8 10 10 12 8 8 6 7 10 8 10 10 8 8 8 8 13 15 12 9 9 10 10 10 10 7 6 6 6 6 6 12 10 8 8 10 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 6 6 6 8 6 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 9 9 9 8 10 10 8 10 10 8 8 8 10 10 15 10 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 10 10 9 8 8 8 8 8 8 8 8 6 6 6 10 16 8 8 6 6 6 6 6 6 8 8 6 6 8 8 8 6 6 6 7 9 9 8 8 8 8 8 10 11 11 8 11 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 12 11 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 10 8 6 6 6 6 8 8 8 8 9 8 8 6 6 6 8 8 8 8 8 9 9 8 10 6 6 6 8 10 12 10 8 8 8 8 15 17 8 8 8 10 10 3 0 3 6 6 7 7 8 8 8 8 8 8 8 3 0 3 9 12 10 9 9 9 9 9 14 15 12 6 6 6 6 8 6 6 8 8 3 0 3 6 6 6 8 8 9 10 8 8 6 6 6 6 6 6 6 6 6 6 6 9 8 8 6 6 8 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no063_a13.b1 MSMg01no063_a13.b1 CHROMAT_FILE:
MSMg01no063_a13.b1 PHD_FILE: MSMg01no063_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:14 2005
         (490 letters)



>mm_chr9_64505692_64506577
          Length = 886

 Score =  866 bits (448), Expect = 0.0
 Identities = 475/488 (97%), Gaps = 8/488 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaggagccacgatggcagattacctttgaaagatttgatttagccagcagatgc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggagccacgatggcagattacctttgaaagatttgatttagccagcagatgc 264

                                                                       
Query: 65  cacagagatagaaatctcatcagggcaaaagaaaggcagaaaaacccacccctcgaagcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacagagatagaaatctcatcagggcaaaagaaaggcagaaaaacccacccctcgaagcc 324

                                                                       
Query: 125 actgccgcattgtgcagctttcggctcctgttagctagtgattaatctgtgtctggggaa 184
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actgctgcattgtgcagctttcggctcctgttagctagtgattaatctgtgtctggggaa 384

                                                                       
Query: 185 aaggaagaaaggggcaaacctgataacagaggaggcagcctgtgcatcagtgatggggac 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 385 aaggaagaaaggggcaaacctgataacagaggaggcagcctgtgcatcagtgatggagac 444

                                                                       
Query: 245 tttggtccaagcctcccctggcactgcctgaa--cagccaggtcacccaggggaagcgag 302
           ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 445 tttggtccaagcctcccctggcactgcctgaaaacagccaggtcacccaggggaagcgag 504

                                                                       
Query: 303 gcctttgcaggcagaataactgccatgagttcaaagacagctggtctcaaaaaaaaaaaa 362
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcctttgcaggcagaagaactgccatgagttcaaagacagctggtctcaaaaaaaaaaaa 564

                                                                       
Query: 363 aaaaaagcataaatgaaaaaaatcaaatcattgtctgccatcactctgcagcatctttcc 422
                 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ------gcaaaaatgaaaaaaatcaaatcattgtctgccatcactctgcagcatctttcc 618

                                                                       
Query: 423 aaaggggaatttaaactaagaagttagatgtcctgtttctagaaatagaattgtagggct 482
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaaggggaatttaaattaagaagttagatgtcctgtttctagaaatagaattgtagggct 678

                   
Query: 483 tgggatat 490
           ||||||||
Sbjct: 679 tgggatat 686


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 886
Length adjustment: 10
Effective length of query: 480
Effective length of database: 876
Effective search space:   420480
Effective search space used:   420480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information