XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTCA
GTTATCCTTAATAATCTTAACCAATGCGACATGAACACAATCCTCACCCT
GAACCTTTCACCAGTCTTGCACAGCAAACACTCTCAGATGCCCTTTCTCA
CTGGGCACAAATCCAGTTAGTCTTAGTTAGGCACTAAGCCTAAAGCCATC
ATGAAAATGTACTCCCTACGAGAAAGATCCTAAAAACAGTGACGACCTCC
CAGAGACCTGGTATAGCTTCCACCAACTACTTCCGCTGCCAAGGTCTACC
CCAGCTGCTGAAACCAGAGCAGCCACTAATTGTGGCCTAGGGAAAATGGC
AGCCCAGACAAGAAATAGCCACGTGGCCCAAGGTGTGTGTGTGTATACAT
GTGGGGACATGATTCATGACTCCTCTTTAAGCTGGAAACCTAGGGTTCTT
CCAATTTCAAAATCCCCAATCTCTTCCATCTGTCCCACTTCTCTCCACCT
CTCAGGACACCCCACTCCGGGCCACCACCTTTCCTCCTGGGGACTTTCAA
CAGTCACCATCTACCCTCCCAGTGGCTGGTCCTGCCTCAATCCTCTTATC
TTTCAGTGACATTCTGTTACGATTAGAATGAAGCTAAAATTCCTGAGCAT
GGCCTAAGGAGCCAGGCTAGGATGTAGCCAT

GATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAAACCAAATGGCAGAGAA
GCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCA
AAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA
AATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGACAAAGAGGAACACT
CCTCCTTTGTTGGTGGGATTGCAGACTTGTACAACCACTCTGGAAATCAG
TCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCA
ATACCTCTCCTGCGCCTCACACAAGATGCCCCAACTGGTAAGAAGGACAC
ATGCTCCAATATGTTCATAGCAGCCTTATTTATAATAGCCAGACTGGAAA
GAACCCAGATGCCCCTCAACAGAGGAATGGGTACAGAAAATGTGGTACAT
CTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAAT
TCCTAGCCAAATGGATGGACCTGGAAGGCATCATCCTGAGTGAGGTAACA
CATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTA
GCCCCAAAACTAGGATACCCAAGATATAAGATACAATTTG

Query= MSMg01no063_o10.b1 MSMg01no063_o10.b1 CHROMAT_FILE:
MSMg01no063_o10.b1 PHD_FILE: MSMg01no063_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:27 2005
         (607 letters)



>mm_chr9_90101477_90102483
          Length = 1007

 Score = 1077 bits (557), Expect = 0.0
 Identities = 593/605 (98%), Gaps = 2/605 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattcagtta-tccttaataatcttaaccaatgcgacatgaacacaatcctcac 62
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattcagttact-cttaataatcttaaccaatgcgacatgaacacaatcctcac 262

                                                                       
Query: 63  cctgaacctttcaccagtcttgcacagcaaacactctcagatgccctttctcactgggca 122
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 263 cctgaacctttcaccagtcttgcacagcaaacactttcagatgccctttctcactgggca 322

                                                                       
Query: 123 caaatccagttagtcttagttaggcactaagcctaaagccatcatgaaaatgtactccct 182
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 323 caaatccagttagtcttagttaggcactaagcctaaagccatcttgaaaatgtactccct 382

                                                                       
Query: 183 acgagaaagatcctaaaaacagtgacgacctcccagagacctggtatagcttccaccaac 242
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||
Sbjct: 383 acgagaaagatcctaaaaacagcgacgacctcccagagacctggtatagcttctgccaac 442

                                                                       
Query: 243 tacttccgctgccaaggtctaccccagctgctgaaaccagagcagccactaattgtggcc 302
           ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 443 tactttcgttgccaaggtctaccccagctgctggaaccagagcagccactaattgtggcc 502

                                                                       
Query: 303 tagggaaaatggcagcccagacaagaaatagccacgtggcccaaggtgtgtgtgtgtata 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tagggaaaatggcagcccagacaagaaatagccacgtggcccaaggtgtgtgtgtgtata 562

                                                                       
Query: 363 catgtggggacatgattcatgactcctctttaagctggaaacctagggttcttccaattt 422
           |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 563 catgtggggacatgattcatgactcctcttcaagctggaaacctagggttctttcaattt 622

                                                                       
Query: 423 caaaatccccaatctcttccatctgtcccacttctctccacctctcaggacaccccactc 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 caaaatccccaatctcttccatctgtcccacttctctccacctctcaggacaccccactc 682

                                                                       
Query: 483 cgggccaccacctttcctcctggggactttcaacagtcaccatctaccctcccagtggct 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cgggccaccacctttcctcctggggactttcaacagtcaccatctaccctcccagtggct 742

                                                                       
Query: 543 ggtcctgcctcaatcctcttatctttcagtgacattctgttacgattagaatgaagctaa 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ggtcctgcctcaatcctcttatctttcagtgacattctgttacgattagaatgaagctaa 802

                
Query: 603 aattc 607
           |||||
Sbjct: 803 aattc 807


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)