Query= MSMg01no068_f01.b1 MSMg01no068_f01.b1 CHROMAT_FILE:
MSMg01no068_f01.b1 PHD_FILE: MSMg01no068_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:43 2005
(242 letters)
>mm_chr9_120610497_120611139
Length = 643
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 gaccctttatatacaa-ggacagaggatgacattttctatctggctacttcctgatatag 59
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 gaccctttatatacaaaggacagaggatgacattttctatctggctacttcctgatgtag 260
Query: 60 aggggctgccatttaaaagttttggggtctggaacggctctaagagcattgcttttactt 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 aggggctgccatttaaaagttttggggtctggaacggctctaagagcattgtttttactt 320
Query: 120 cagcctatgttggggacccagcgagtcaacccagggctttctgtaaaaagtttaaatgac 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcctatgttggggacccagtgagtcaacccagggctttctgtaaaaagtttaaatgac 380
Query: 180 ggagttaagatgttagaatgtggaaaaagaggaaatggatgatgaaggggaggagcaagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagttaagatgttagaatgtggaaaaagaggaaatggatgatgaaggggaggagcaagg 440
Query: 240 ctg 242
|||
Sbjct: 441 ctg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_f01.g1 MSMg01no068_f01.g1 CHROMAT_FILE:
MSMg01no068_f01.g1 PHD_FILE: MSMg01no068_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:43 2005
(245 letters)
>mm_chr9_120768058_120768702
Length = 645
Score = 426 bits (220), Expect = e-124
Identities = 238/244 (97%)
Strand = Plus / Minus
Query: 1 gtcttgtgggaacaccctcagcctggtggtggtcatctgcccgcctgtggtacacacctg 60
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 392 gtcttgtgggaacaccctcagcctggcggtggtcatctgcctgcctgtggtacacacctg 333
Query: 61 ctcttccaaggcagcgaaaacggacggtttcagtaagggccacaggcttatactatgact 120
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 332 ctcttccaaggcagcgaaaacggacggtttcagtaagggccgcgggcttatactatgact 273
Query: 121 gttttgtgctgtgatagaacatcactcaggaagcaagtttcctgctcagagaatgctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gttttgtgctgtgatagaacatcactcaggaagcaagtttcctgctcagagaatgctgtg 213
Query: 181 tataatagcaagcaggcttgctttcaatttcctgccttgatgtccctcagtgatggacca 240
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tagaagagcaagcaggcttgctttcaatttcctgccttgatgtccctcagtgatggacca 153
Query: 241 tgtc 244
||||
Sbjct: 152 tgtc 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
