Query= MSMg01no069_c07.b1 MSMg01no069_c07.b1 CHROMAT_FILE:
MSMg01no069_c07.b1 PHD_FILE: MSMg01no069_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:48 2005
(144 letters)
>mm_chr9_71007271_71007813
Length = 543
Score = 252 bits (130), Expect = 1e-71
Identities = 139/142 (97%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 1 gtctagcttctgcccggaattgttggtctgtgtggttgaaactcttctcattccatggaa 60
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 gtctagcttctgccc-gaattgttggtctgtgtgggtgaaactcttctcattccatggaa 259
Query: 61 gtcaacacagaacatggtgaccacaaatccatggagttaactccccatcagcaatcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 260 gtcaacacagaacatggtgaccacaaatccatggagttaactccccatcagtaatcagac 319
Query: 121 agtctagtttgcagttgacatc 142
||||||||||||||||||||||
Sbjct: 320 agtctagtttgcagttgacatc 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 543
Length adjustment: 8
Effective length of query: 136
Effective length of database: 535
Effective search space: 72760
Effective search space used: 72760
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_c07.g1 MSMg01no069_c07.g1 CHROMAT_FILE:
MSMg01no069_c07.g1 PHD_FILE: MSMg01no069_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:48 2005
(214 letters)
>mm_chr9_71163697_71164310
Length = 614
Score = 344 bits (178), Expect = 2e-99
Identities = 205/220 (93%), Gaps = 12/220 (5%)
Strand = Plus / Minus
Query: 1 aaggtttctgagaggctagggtgggcctgccaggctgccctgcactatttcccagcagtg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 414 aaggtttctgagaggctagggtgggcctgccaggctgtcctgcactatttcccagcagtg 355
Query: 61 ggtgaccggtccagactcagcttcttcctctgtggagtagggacagtggcatgctcctgt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggtgaccggtccaggctcagcttcttcctctgtggagtagggacagtggcatgctcctgt 295
Query: 121 cctatagacacgggtcacaggtgaactcaaagtgctcaccagcaggaggcactgtgcaag 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cctatagacatgggtcacaggtgaactcaaagtgctcaccagcaggaggcactgtgcaag 235
Query: 181 tgccttgtgtta------ttttttatcttctctgcatcac 214
||||||||| | ||||||||||||||||||
Sbjct: 234 tgccttgtg--agagacc----ttatcttctctgcatcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
