Query= MSMg01no072_c12.b1 MSMg01no072_c12.b1 CHROMAT_FILE:
MSMg01no072_c12.b1 PHD_FILE: MSMg01no072_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:48 2005
(543 letters)
>mm_chr9_113569977_113570919
Length = 943
Score = 1027 bits (531), Expect = 0.0
Identities = 537/539 (99%)
Strand = Plus / Plus
Query: 5 gaattcttggtgtgacacctttgtaaaaaacaaacacacaaacaaaatatatatttattt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggtgtgagacctttgtaaaaaacaaacacacaaacaaaatatatatttattt 264
Query: 65 atacatttaattcaccttgaaatacttaatttttcattcattatttattgaatacacctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atacatttaattcaccttgaaatacttaatttttcattcattatttattgaatacacctg 324
Query: 125 tatgtgtgcaggtgtgcttatgccacagtacacacagggaagtcagagcacaaatgtcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgtgtgcaggtgtgcttatgccacagtacacacagggaagtcagagcacaaatgtcaa 384
Query: 185 gagttggttctctcctgtcaccacatggatcccagggatggaactcaagttatcaggatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagttggttctctcctgtcaccacatggatcccagggatggaactcaagttatcaggatt 444
Query: 245 ggtggcatgcacctttatcccctgagccatcttgatagccaatcaaaacatttgtaacag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtggcatgcacctttatcccctgagccatcttgatagccaatcaaaacatttgtaacag 504
Query: 305 gaatgggtgtaatggcacacgcctttaatcccaacactggggaggcagaggcaagcagaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaatgggtgtaatggcacacgcctttaatcccaacactggggaggcagaggcaagcagaa 564
Query: 365 gctgtcacctcaaagaacaagaatataacaacaaatgcactgatctcttttccaattagg 424
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctgtcatctcaaagaacaagaatataacaacaaatgcactgatctcttttccaattagg 624
Query: 425 aaatcatgattgctaatatgcaaatttacaagaaatatctagaatttgttttatgccagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaatcatgattgctaatatgcaaatttacaagaaatatctagaatttgttttatgccagt 684
Query: 485 acactgctttgacttttttcttaagtaaaatatcacaaatccaataggtatcaaaacat 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acactgctttgacttttttcttaagtaaaatatcacaaatccaataggtatcaaaacat 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_c12.g1 MSMg01no072_c12.g1 CHROMAT_FILE:
MSMg01no072_c12.g1 PHD_FILE: MSMg01no072_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:48 2005
(464 letters)
>mm_chr9_113698326_113699189
Length = 864
Score = 814 bits (421), Expect = 0.0
Identities = 454/465 (97%), Gaps = 1/465 (0%)
Strand = Plus / Minus
Query: 1 aggtcctctggaaaag-agcaagtaatctttaattgctaagccactgctaaaccttctct 59
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aggtcctccggaaaagcagcaagtaatctttaattgctaagccactgctaaaccttctct 466
Query: 60 ccagtccccaggtccagttaacaagttttcttaacaagtgtaagtccgcctagaatttat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccagtccccaggtccagttaacaagttttcttaacaagtgtaagtccgcctagaatttat 406
Query: 120 cagtgaatttaaaaatgattcaaattaataaagttgttttttgtttatttttgagatgaa 179
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 405 cagtgaatttaaaaatgattcacattaataaagttgttttttgtttatttttgagatgaa 346
Query: 180 gtttttgatagctcaagatgatgaactcctgattctcctgtccctactctgaggtccttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gtttttgatagctcaagatgatgaactcctgattctcctgtccctactctgaggtccttc 286
Query: 240 tttaaaatacaaaatacaggagtgctgactcagccgtttagagcactcgctgctcttgca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tttaaaatacaaaatacaggagtgctgactcagccgtttagagcactcgctgctcttgca 226
Query: 300 gaggaatcccagtgtttccagcaacccacccggcaattcaagctccaggggctctgatga 359
|||||||||| |||||||||||||||||| | |||| ||||| | |||||||||||||||
Sbjct: 225 gaggaatcccggtgtttccagcaacccacacagcaactcaagtttcaggggctctgatga 166
Query: 360 ccttttctggcctctgcgggctgcgcacgcatgtggtgagcacatacacaagcagggaaa 419
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 165 ccttttctggcctctgcaggctgcgcacgaatgtggtgagcacatacacaagcagggaaa 106
Query: 420 acacactatccataaaaataaatcttaacaaggaaaaccccaagc 464
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 acacactatccataaaaataaatcttaacaaggaaaaccccaagc 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
