Query= MSMg01no075_d07.b1 MSMg01no075_d07.b1 CHROMAT_FILE:
MSMg01no075_d07.b1 PHD_FILE: MSMg01no075_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:49 2005
(202 letters)
>mm_chr9_78353347_78353949
Length = 603
Score = 364 bits (188), Expect = e-105
Identities = 200/206 (97%), Gaps = 6/206 (2%)
Strand = Plus / Minus
Query: 1 catcttctaccc---cccatttagcaatattatagtcactttcccatttaactactcatc 57
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 catcttcta--caaacccatttagcaatattatagtcactttcccatttaactactcatc 251
Query: 58 ccatggcctcagaactacattcagtctgtccccaacctctgctgacttcgttttttaaat 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ccatggcctcagaactacattcagtctgtccccaacctctgctgacttcgttttttaaat 191
Query: 118 atattttattaattatttttgaaattttcatacactga-ttttttttttttatgtaagta 176
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 190 atattttattaattatttttgaaattttcatacactgatttttttttttttatgtaagta 131
Query: 177 cactgtagctgtcttcagacactcca 202
||||||||||||||||||||||||||
Sbjct: 130 cactgtagctgtcttcagacactcca 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 603
Length adjustment: 8
Effective length of query: 194
Effective length of database: 595
Effective search space: 115430
Effective search space used: 115430
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no075_d07.g1 MSMg01no075_d07.g1 CHROMAT_FILE:
MSMg01no075_d07.g1 PHD_FILE: MSMg01no075_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:49 2005
(260 letters)
>mm_chr9_78224282_78224941
Length = 660
Score = 480 bits (248), Expect = e-140
Identities = 257/260 (98%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 1 ttgcacactataaatcaatggttcccaatctttctaatgcttaggccctttaatacattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttgcacactataaatcaatggttcccaatctttctaatgcttaggccctttaatacattt 261
Query: 61 cgcgttgtgttggatttccaatcgtacatttctttgctacttcataactcgaccactctt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cgcgttgtgttg-atttccaatcgtacatttctttgctacttcataactcgaccactctt 320
Query: 121 ctgaattgtaatgtaaatatctgatatacaggattatattctgatcccaggttgagacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaattgtaatgtaaatatctgatatacaggattatattctgatcccaggttgagacta 380
Query: 181 ctgccttaactggagtaggttaaaaagtacaaaagggtagccagaaatggtggagcacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgccttaactggagtaggttaaaaagtacaaaagggtagccagaaatggtggagcacac 440
Query: 241 ctttatcatataacttggga 260
|||||||| | |||||||||
Sbjct: 441 ctttatcacagaacttggga 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 660
Length adjustment: 9
Effective length of query: 251
Effective length of database: 651
Effective search space: 163401
Effective search space used: 163401
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
