Query= MSMg01no076_f23.b1 MSMg01no076_f23.b1 CHROMAT_FILE:
MSMg01no076_f23.b1 PHD_FILE: MSMg01no076_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:19 2005
(492 letters)
>mm_chr9_36700224_36701114
Length = 891
Score = 777 bits (402), Expect = 0.0
Identities = 455/488 (93%), Gaps = 28/488 (5%)
Strand = Plus / Minus
Query: 7 gaattcctttcaga-ttccctgctttac-aagtagttggaaattttaattaattaattaa 64
|||||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 752 gaattcctttcagagtt-cctgctttacaaagtagttggaaattttaactaattaattaa 694
Query: 65 ttaattaattaattaattaattaataaaaaagtgctttctatacttatatagagaatgct 124
|| ||||||||||||||||||||||||||||||||||
Sbjct: 693 tt------------------------aaaaagtgctttctatacttatatagagaatgct 658
Query: 125 gaatatgtagtagcctggagtgttgctgcctggaatggtgcagaagttaagcaatggagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gaatatgtagtagcctggagtgttgctgcctggaatggtgcagaagttaagcaatggagg 598
Query: 185 gatagaaagcttcatgctggtggattgtctcactcagggtttggtgctcttacaccttgt 244
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 597 gatagaaagcttcatgccggtggattgtctcactcagggtttggtgctcttacacctt-t 539
Query: 245 tttggcgacaagggccttaccatcccacaagccagcccatccaccctgtccatcactaag 304
||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tttggtgacaagggccccaccatcccacaagccagcccatccaccctgtccatcactaag 479
Query: 305 gttgctgggcccaagccacagtccttgcctcatcctaacctttgtcctctcccatgcagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gttgctgggcccaagccacagtccttgcctcatcctaacctttgtcctctcccatgcagg 419
Query: 365 ttccatcaacttggacaacctgcagtccctgtcctcagacaatgccaccatggccatgca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttccatcaacttggacaacctgcagtccctgtcctcagacaatgccaccatggccatgca 359
Query: 425 gcaggcaatgatggctgcacatgatgattcattggatggcacggaagaagaggatgaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gcaggcaatgatggctgcacatgatgattcattggatggcacggaagaagaggatgaaga 299
Query: 485 tgatatgg 492
||||||||
Sbjct: 298 tgatatgg 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 891
Length adjustment: 10
Effective length of query: 482
Effective length of database: 881
Effective search space: 424642
Effective search space used: 424642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_f23.g1 MSMg01no076_f23.g1 CHROMAT_FILE:
MSMg01no076_f23.g1 PHD_FILE: MSMg01no076_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:19 2005
(125 letters)
>mm_chr9_36573418_36573942
Length = 525
Score = 242 bits (125), Expect = 7e-69
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 1 agcatggacccagttaagttctgagtcagtttgggttaatgtgagaccctgccacagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcatggacccagttaagttctgagtcagtttgggttaatgtgagaccctgccacagaga 260
Query: 61 aagttaagtggggctgaaggtggggaaagagggggaggtaatttgggcaggaaggtaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagttaagtggggctgaaggtggggaaagagggggaggtaatttgggcaggaaggtaagt 320
Query: 121 gggaa 125
|||||
Sbjct: 321 gggaa 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 125
Length of database: 525
Length adjustment: 8
Effective length of query: 117
Effective length of database: 517
Effective search space: 60489
Effective search space used: 60489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
