NNAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGG
AATTCAATTAGTACCTGGATGTCTCAGCTGGTCTTCAGTATATTCTGGGA
TCCTGAAGAAGTAAGTTCTTATGTCAATGAAGGAAATACCTTCCTAATAA
GTTGAGAACAAACAGGCAAAGAGCTAATGCTTCTTTCTTCCATGCCTTTA
TACAGGTTTCCAACAGAAGCTGTGGCCTGGAGTAAAGGTAGATCTTCCCT
CCCACCTCAAGATCTGGATTAGAAGTGGATCTTCTTACTTCAAATTAATC
ACAAATCTCTCACAAGCATGCACCACTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTC
CTCCTCCTCCACCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCA
GCTAATTTTGGACGCAGTGAAGTTGGGAACCAAATATAGCTATTACAAAT
ATGGATTCCATATGTGAGAGAAAATATGCAGCATTTATCTCTCGAAGTCT
GGCTGATTTTGCTAGATATACAATCTCCAGAATCCCCTTCTAATACTAAG
TGACCTAACTTTTATCCTCCTGATGTTTAATATTCGACAGTTTATACGAC
CCAGAGTGCCCTCTTAATCCATG

NAACATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAATTAAAAGTATCTGTCACATCATAATTT
TTCTTTCCTGACAATTGTTGTTTTATATTTTGCGTGTTTGGAGTTTTTTC
TTTTTTTTTTCTCTTTCCTTTTTATTGAGATAGGCTCTCACTGTGTTTCA
GACTGACTTGTTAGGTTTTCTATTGTGTTTACTTTGTACTTTGCATGTGT
ATGCATGCTACTTATTTGTATGGAGGTTCGAGGACAAGTTGTAGAAGTTG
GTGTTCTCCACGTTGTGGGTCCTGGGGATTGATCTTAGAGTATTTGGCTT
CATGGCAAATCCCATACCCTCTGACCCATCTCCTGGTTCTACATTTTTAA
TGCTCTTTTATGGCCCCAGGACATTGCACATGCTGTTCTCTCAACCTGGG
ATTATATTCCCCTACTGACAACTTTTTTTTTTTTTTTTTTGGCTATTTTT
TAGTTTTTTTGCTTTCTAAACAAGTTACTTAACCTTACTGCCCCATATGC
TTGGAACCCTCGCTACATGTTCCCACCTTTTCCTTATTTGACAATATTCT
ACATAGCCAGAAGTCAATCTTTCTATTTCCCGGATTTCCCGGTTACACAC
CCCTCCCTTTCCTCATAATAT

Query= MSMg01no078_n01.g1 MSMg01no078_n01.g1 CHROMAT_FILE:
MSMg01no078_n01.g1 PHD_FILE: MSMg01no078_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:15 2005
         (436 letters)



>mm_chr9_82849876_82850713
          Length = 838

 Score =  779 bits (403), Expect = 0.0
 Identities = 433/449 (96%), Gaps = 13/449 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattaaaa-gtatctgtcacatcataatttttctttcctgacaattgttgttttatattt 59
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aattaaaatgtatctgtcacatcataatttttctttcctgacaattgttgttttatattt 473

                                                                       
Query: 60  tgcgtgtttggagttttttc-ttttttttttctctttcctttttattgagataggctctc 118
           |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 472 tgcgtgtttggagttttttctttttttttttctctttcatttttattgagataggctctc 413

                                                                       
Query: 119 actgtgtttcagactgacttgttaggttttctattgtgtttactttgtactttgcatgtg 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 actgtgtttcagactgacttgttaggttttctattgtgtttactttgtactttgcatgtg 353

                                                                       
Query: 179 tatgcatgctacttatttgtatggaggttcgaggacaagttgtagaagttggtgttctcc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tatgcatgctacttatttgtatggaggttcgaggacaagttgtagaagttggtgttctcc 293

                                                                       
Query: 239 acgttgtgggtcctggggattgatcttagagtatttggcttcatggcaaatcccataccc 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 acgttgtgggtcctggggattgatcttagagtatttggcttcatggcaaatcccataccc 233

                                                                       
Query: 299 tctgacccatctcctggttctacatttttaatgctcttttatggccccaggacattgcac 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tctgacccatctcctggttctacatttttaatgctcttttatggccccaggacattgcac 173

                                                                       
Query: 359 atgctgttctctcaacctgggattatattcccctactgacaactttttttt-tttttttt 417
           |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 172 atgctgttctctcaacctgggattatattcccctcctgacaacttttttttgtttttttt 113

                                        
Query: 418 ----------ttggctattttttagtttt 436
                     |||| ||||||||||||||
Sbjct: 112 gttttttgttttggttattttttagtttt 84


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 838
Length adjustment: 9
Effective length of query: 427
Effective length of database: 829
Effective search space:   353983
Effective search space used:   353983
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)