Query= MSMg01no080_h20.b1 MSMg01no080_h20.b1 CHROMAT_FILE:
MSMg01no080_h20.b1 PHD_FILE: MSMg01no080_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:24 2005
(417 letters)
>mm_chr9_61310988_61311800
Length = 813
Score = 748 bits (387), Expect = 0.0
Identities = 408/417 (97%), Gaps = 4/417 (0%)
Strand = Plus / Plus
Query: 1 ctgagttacaggaaagaaagaggctgtggactcggataagccctgctaccagatgctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgagttacaggaaagaaagaggctgtggactcggataagccctgctaccagatgctcag 260
Query: 61 tgtcttctgtatcatgtccccgctgacctcttagtcaagaggctgagcctggtgaccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcttctgtatcatgtccccgctgacctcttagtcaagaggctgagcctggtgaccatt 320
Query: 121 tacagctcccatccatggcttccagccttgctgtcagatgtgaaaagaccccctccttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacagctcccatccatggcttccagccttgctgtcagatgtgaaaagaccccctccttcc 380
Query: 181 tcatctggatagagagtcccaggaaaggggtctgagtcacacagtcatggccaagtgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatctggatagagagtcccaggaaaggggtctgagtcacacagtcatggccaagtgagg 440
Query: 241 agtatcttcatagcctccaaggtagttagttacacagtggaggacagctcctcaaagtga 300
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 agtatcttcatagcctccaaggtagtta----cacagtggaggacagctcctcaaagtga 496
Query: 301 gtatttaaatatagggcacattgagtcaatattacaacagtccacagaggcctaggaagt 360
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 497 gtgtttaaatatagggcacattgagtcaacattacaacagtccacagaggcctaggaagt 556
Query: 361 agaagcagggtttcaattattaattattgtgtgcttattagcatatgccatgtaggt 417
|||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 557 agaagcagggtttcaattattaattattgtatgtttgttagcatatgccatgtaggt 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 813
Length adjustment: 9
Effective length of query: 408
Effective length of database: 804
Effective search space: 328032
Effective search space used: 328032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_h20.g1 MSMg01no080_h20.g1 CHROMAT_FILE:
MSMg01no080_h20.g1 PHD_FILE: MSMg01no080_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:25 2005
(321 letters)
>mm_chr9_61478722_61479442
Length = 721
Score = 569 bits (294), Expect = e-166
Identities = 315/322 (97%), Gaps = 2/322 (0%)
Strand = Plus / Minus
Query: 1 agaattgcaccgtgagtcgggtttgtcctgatggctcagctggttgcttttcttatacct 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agaattgcaccgtgagtcaggtttgtcctgatggctcagctggttgcttttcttataccc 462
Query: 61 cgaccatcgatggc-gatatttgccggttgcaagagcagtacagaaagtgtgtttgtagt 119
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cgaccatcgatggcgga-atttgccggttgcaagagcagtacagaaagtgtgtttgtagt 403
Query: 120 gtaggagcagctaagccgagcatctgtgtgcatcatggggaaccatccaggaagctgttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtaggagcagctaagccgagcatctgtgtgcatcatggggaaccatccaggaagctgttg 343
Query: 180 gctcctgatgcatactgggggcaggaggggacagacattgtcttcaatcctgtagccatc 239
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 342 gctcctgatgcatactgggggcgggaggggacagacattgtcttcaatcctgtagccatc 283
Query: 240 tggttcttatggataatttcacacccatgttcctgtatgtagatagccctggttcaattc 299
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggttccaatggataatttcacacccatgttcctgtatgtagatagccctggttcaattc 223
Query: 300 aactagtcacaagctgaagcaa 321
||||||||||||||||||||||
Sbjct: 222 aactagtcacaagctgaagcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
