Query= MSMg01no080_h24.b1 MSMg01no080_h24.b1 CHROMAT_FILE:
MSMg01no080_h24.b1 PHD_FILE: MSMg01no080_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:25 2005
(410 letters)
>mm_chr9_92485830_92486639
Length = 810
Score = 743 bits (384), Expect = 0.0
Identities = 399/404 (98%)
Strand = Plus / Plus
Query: 7 gaattccaggtacagacccaatgctgtggagctatgggtatcggttgaggacatggttgt 66
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccaggtacagacagaatgctgtggagctatgggtatcggttgaggacatggttgt 266
Query: 67 gggtaaggacttccacttacctgtttttcttgcatttactagattctcctgaattacttt 126
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 267 gggtaaggacttccacttacctgtttttcttgcacttactagattctcctgaattacttt 326
Query: 127 ggaaactatgttccaaactcatggacacaggaaaatggctgtgcgctttgtgatgttgac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggaaactatgttccaaactcatggacacaggaaaatggctgtgcgctttgtgatgttgac 386
Query: 187 acaattgacttgtctacagtagatgtaagtgggatttatttgtatgaacttacattaaaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 acaattgacttgtctacagtagatgtaagtgggatttatttgtatgaacttacattaaaa 446
Query: 247 atctacattgtcataaaatgcagcggctcaggaaaaaggcaaattgttatgtactgtccc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atctacattgtcataaaatgcagcggctcaggaaaaaggcaaattgttatgtactgtccc 506
Query: 307 ttggcgattactagtggacttacactgtaaaaggacggcgactgagaaagtctattagtt 366
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 507 ttggcgattactagtggacttacactgtaaaaggacggtgactgagaaagtctattagtt 566
Query: 367 tgtctttttgaactgttttgaaaccactaacagccaaaagttgg 410
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 567 tgtctttttgaattgttttgaaaccactaacagccaaaagttgg 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_h24.g1 MSMg01no080_h24.g1 CHROMAT_FILE:
MSMg01no080_h24.g1 PHD_FILE: MSMg01no080_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:25 2005
(345 letters)
>mm_chr9_92672076_92672824
Length = 749
Score = 549 bits (284), Expect = e-161
Identities = 331/348 (95%), Gaps = 4/348 (1%)
Strand = Plus / Minus
Query: 1 tcttac-aagctttagaattttccttttgac---aaaaaaaaatgtaaatatctcaattt 56
|||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 548 tcttacaaagctttagaattttccttttgacaaaaaaaaaaaatgtaaatctctcaattt 489
Query: 57 gtttgcatcttacattactttttacagtgttaagattgaaaaagctctgcccctctgaat 116
||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtttgcagcttacataacttcttacagtgttaagattgaaaaagctctgcccctctgaac 429
Query: 117 tgtaccttcactctgcattttcaaaccctataaaacatgggactggtaagacctcccttt 176
||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 428 tgtacctccattctgcattttcaaaccttataaaacatggggctggtaagacctcccttt 369
Query: 177 tgctctaacttgttttcttcatgtctcaaatgatcaccttggaggtacaatgcaattttc 236
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 368 tgctctaacttgttttcttcatgcctcaaatgatcaccttggaggtacaatgtaattttc 309
Query: 237 cttattatcaacccaactactcctttcaaagaactcaataacatttaaggagacagtgtt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 308 cttattatcaacccaactactcctttcaaagaactcaataacatttaaggagagagtgtt 249
Query: 297 aagggacacacactatctttcatgaagactggcttgtatcctgctcag 344
|||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 248 aagggacacacactatctttcatgaagactggcttgaatcctgctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 749
Length adjustment: 9
Effective length of query: 336
Effective length of database: 740
Effective search space: 248640
Effective search space used: 248640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
