Query= MSMg01no081_e17.b1 MSMg01no081_e17.b1 CHROMAT_FILE:
MSMg01no081_e17.b1 PHD_FILE: MSMg01no081_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:27 2005
(592 letters)
>mm_chr9_52021522_52022514
Length = 993
Score = 1046 bits (541), Expect = 0.0
Identities = 577/589 (97%), Gaps = 1/589 (0%)
Strand = Plus / Minus
Query: 1 cacatgccaccctggtagggggtctggatactgggaaaggtaacacaacggagctgctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cacatgccaccctggtagggggtctggatactgggaaaggtaacacaacggagctgctag 730
Query: 61 cttcagccttcagtaaacattccctaaagatacctaggtgacctgagagttgaaactagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cttcagccttcagtaaacattccctaaagatacctaggtgacctgagagttgaaactagt 670
Query: 121 atttggtttgatactaaattctc-ttttttttcaaagtatcatttatttatgaaataata 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 669 atttggtttgatactaaattctctttttttttcaaagtatcatttatttatgaaataata 610
Query: 180 gccagtatttccaagtagcctttgcatttaccctgcattggttctgtcttgggtttcacc 239
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 609 gccagtatttccaagtagcctttgcatttaccctggattggctctgtcttgggtttcacc 550
Query: 240 tctagatcatcttcctctagatcatgcttgggtcctgccaaaaggtaccttggtctgtga 299
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 549 tctagatcatcttcctctcgatcatgcatgggtcctgccaaaaggtaccttggtctgtga 490
Query: 300 cacagatatcaatctcatcaggaatctgaagtcagaaacagaggaggaaaaaaagaaatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cacagatatcaatctcatcaggaatctgaagtcagaaacagaggaggaaaaaaagaaatc 430
Query: 360 atgctgcagattttcacagaataaacgctggtaggcatagcagagggccgtagacagcca 419
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 429 atgctgcagattttcacagaataaacgctggtaggcatagcagagggctgtagacagcca 370
Query: 420 acatttcctaagacaacgcatgtgtatggttggtactaagagaattttaaaggaattaac 479
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 369 acatttcctaagacaatgcatgtatatggttggtactaagagaattttaaaggaattaac 310
Query: 480 ttgtttaaaagttgtggttagtagagcactcactcagataccgcacaaagattactacgt 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 309 ttgtttaaaagttgtggttagtagagcactcactcagataccgcacaaagattactacat 250
Query: 540 tctagttttggacatgcccctctagactaacaaatttcctatgtgagag 588
||||||||| ||| |||||||||||||||| ||||||||||||||||||
Sbjct: 249 tctagttttagacgtgcccctctagactaataaatttcctatgtgagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 993
Length adjustment: 10
Effective length of query: 582
Effective length of database: 983
Effective search space: 572106
Effective search space used: 572106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_e17.g1 MSMg01no081_e17.g1 CHROMAT_FILE:
MSMg01no081_e17.g1 PHD_FILE: MSMg01no081_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:27 2005
(291 letters)
>mm_chr9_51913151_51913841
Length = 691
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%)
Strand = Plus / Plus
Query: 1 tggtagacaggaggttgagctaccccagctagatctgcattctccagcaaggagcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtagacaggaggttgagctaccccagctagatctgcattctccagcaaggagcttctg 260
Query: 61 ccaggtgcactgtgattctcacccccacctacgcaatctcctgcttcgttgctcttgtcc 120
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ccaggtgcactgtaattctcacccccacctatgcaatctcctgcttcgttgctcttgtcc 320
Query: 121 tgtgtctctcatttaatgtacatctgactcacctggaaggtttgctaagaaacttgctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtctctcatttaatgtacatctgactcacctggaaggtttgctaagaaacttgctgg 380
Query: 181 aatcctttctcggactttgtggtagagcagacagaccacagccctgcctcaagcatctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcctttctcggactttgtggtagagcagacagaccacagccctgcctcaagcatctcc 440
Query: 241 attgttatcacattcctgggtgagaccaaggctccttccctagaaaccaca 291
|||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 attgctatcacattcctgggtgagaccaaggctccttccctaggaaccaca 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
