Query= MSMg01no082_c23.b1 MSMg01no082_c23.b1 CHROMAT_FILE:
MSMg01no082_c23.b1 PHD_FILE: MSMg01no082_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:36 2005
(197 letters)
>mm_chr9_62849610_62850206
Length = 597
Score = 323 bits (167), Expect = 4e-93
Identities = 183/197 (92%), Gaps = 14/197 (7%)
Strand = Plus / Plus
Query: 1 gttaatgaattaaactagcaagctcctcgagagtggcatacatttactatgctaatctgc 60
||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 215 gttaatgaattaaactagcaagc--------------atacatttactatgctaatctgc 260
Query: 61 tgaacaccaagagtctagccacacacatgggtgtttctcctagtaatggcacgattgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacaccaagagtctagccacacacatgggtgtttctcctagtaatggcacgattgact 320
Query: 121 caagagctacagctcactgctattgcctagcatcccaagacattactgcagactgctagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagagctacagctcactgctattgcctagcatcccaagacattactgcagactgctagc 380
Query: 181 tcaggaaacgaagaaat 197
|||||||||||||||||
Sbjct: 381 tcaggaaacgaagaaat 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 597
Length adjustment: 8
Effective length of query: 189
Effective length of database: 589
Effective search space: 111321
Effective search space used: 111321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no082_c23.g1 MSMg01no082_c23.g1 CHROMAT_FILE:
MSMg01no082_c23.g1 PHD_FILE: MSMg01no082_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:36 2005
(288 letters)
>mm_chr9_62986402_62987089
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 1 ttcctgtgcccaagggctggatgggtccagcgagggggaggggagactggcggagctggg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 488 ttcctgtgcccaagggctggatgggtccagcgagggggaggggagactggtggagctggg 429
Query: 61 tggggggcagggaggcaggcgaggcggccaacgaggttggtgtgactctctctccagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tggggggcagggaggcaggcgaggcggccaacgaggttggtgtgactctctctccagaag 369
Query: 121 ctcacgacgccctgcaccacttctcctgcaagatgctgacaccccggcactgcaccggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctcacgacgccctgcaccacttctcctgcaagatgctgacaccccggcactgcaccggca 309
Query: 181 actgctccttcaagcctccgctgctgccctagcgccggcttggccgcgcccacgcgccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 actgctccttcaagcctccgctgctgccctagcgccggcttggccgcgcccacgcgccct 249
Query: 241 caagccatgctgttcctttctgtaaatacccgctgcagtggcggccca 288
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 248 caagccatgctgctcctttctgtaaatacccgctgcagtggcggccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
