Query= MSMg01no083_b01.b1 MSMg01no083_b01.b1 CHROMAT_FILE:
MSMg01no083_b01.b1 PHD_FILE: MSMg01no083_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:41 2005
(547 letters)
>mm_chr9_61310964_61311906
Length = 943
Score = 994 bits (514), Expect = 0.0
Identities = 535/544 (98%), Gaps = 4/544 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagccacctgtagggctgagttacaggaaagaaagaggctgtggactcggataa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagccacctgtagggctgagttacaggaaagaaagaggctgtggactcggataa 263
Query: 64 gccctgctaccagatgctcagtgtcttctgtatcatgtccccgctgacctcttagtcaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gccctgctaccagatgctcagtgtcttctgtatcatgtccccgctgacctcttagtcaag 323
Query: 124 aggctgagcctggtgaccatttacagctcccatccatggcttccagccttgctgtcagat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggctgagcctggtgaccatttacagctcccatccatggcttccagccttgctgtcagat 383
Query: 184 gtgaaaagaccccctccttcctcatctggatagagagtcccaggaaaggggtctgagtca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgaaaagaccccctccttcctcatctggatagagagtcccaggaaaggggtctgagtca 443
Query: 244 cacagtcatggccaagtgaggagtatcttcatagcctccaaggtagttagttacacagtg 303
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 444 cacagtcatggccaagtgaggagtatcttcatagcctccaaggtagtta----cacagtg 499
Query: 304 gaggacagctcctcaaagtgagtatttaaatatagggcacattgagtcaacattacaaca 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaggacagctcctcaaagtgagtgtttaaatatagggcacattgagtcaacattacaaca 559
Query: 364 gtccacagaggcctaggaagtagaagcagggtttcaattattaattattgtgtgcttatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 560 gtccacagaggcctaggaagtagaagcagggtttcaattattaattattgtatgtttgtt 619
Query: 424 agcatatgccatgtaggtgcagactagaggctcagctcctctggagctggagttacagat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agcatatgccatgtaggtgcagactagaggctcagctcctctggagctggagttacagat 679
Query: 484 ggttgtgagctgccccacatggctgctgggaactaaacttggttcccttagaagaacagt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 680 ggttgtgagctgccccacatggctgctgggaactaaacttggttcccttagaaaaacagt 739
Query: 544 aagc 547
||||
Sbjct: 740 aagc 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 943
Length adjustment: 10
Effective length of query: 537
Effective length of database: 933
Effective search space: 501021
Effective search space used: 501021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_b01.g1 MSMg01no083_b01.g1 CHROMAT_FILE:
MSMg01no083_b01.g1 PHD_FILE: MSMg01no083_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:41 2005
(357 letters)
>mm_chr9_61478892_61479648
Length = 757
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%), Gaps = 2/344 (0%)
Strand = Plus / Minus
Query: 1 attgcaccgtgagtcgggtttgtcctgatggctcagctggttgcttttcttatacctcga 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 348 attgcaccgtgagtcaggtttgtcctgatggctcagctggttgcttttcttataccccga 289
Query: 61 ccatcgatggc-gatatttgccggttgcaagagcagtacagaaagtgtgtttgtagtgta 119
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ccatcgatggcgga-atttgccggttgcaagagcagtacagaaagtgtgtttgtagtgta 230
Query: 120 ggagcagctaagccgagcatctgtgtgcatcatggggaaccatccaggaagctgttggct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ggagcagctaagccgagcatctgtgtgcatcatggggaaccatccaggaagctgttggct 170
Query: 180 cctgatgcatactgggggcaggaggggacagacattgtcttcaatcctgtagccatctgg 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cctgatgcatactgggggcgggaggggacagacattgtcttcaatcctgtagccatctgg 110
Query: 240 ttccaatggataatttcacacccatgttcctgtatgtagatagccctggttcaattcaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ttccaatggataatttcacacccatgttcctgtatgtagatagccctggttcaattcaac 50
Query: 300 tagtcacaagctgaagcaaaatggctagaagggagatgaggaag 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tagtcacaagctgaagcaaaatggctagaagggagatgaggaag 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
