Query= MSMg01no085_b06.b1 MSMg01no085_b06.b1 CHROMAT_FILE:
MSMg01no085_b06.b1 PHD_FILE: MSMg01no085_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:21 2005
(206 letters)
>mm_chr9_61087779_61088384
Length = 606
Score = 344 bits (178), Expect = 2e-99
Identities = 199/206 (96%)
Strand = Plus / Plus
Query: 1 ggtcttcctctctctgagacagcatcctctctccctcccctgggtccctatcttataact 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ggtcttcctctctctgagacagcatcctctctccctcccctgggtccctaccttataact 260
Query: 61 cactgctctcatccccacattcaattaaaatccaccacccctggcagaacttaccttatg 120
||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||
Sbjct: 261 cactgctctcatccccacattcaattaaattccaccacccctggcaaaacttagcttatg 320
Query: 121 ttaaggtccaagacacagacaccaagagaggctggaaggagacgtcgaagcttttcttca 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ttaaggtccaagaaacagacaccaagagaggctggaaggagacgtcgaagcttctcttca 380
Query: 181 actaagactcccaaccagctcaattc 206
|||||||||| |||||||||||||||
Sbjct: 381 actaagactcacaaccagctcaattc 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no085_b06.g1 MSMg01no085_b06.g1 CHROMAT_FILE:
MSMg01no085_b06.g1 PHD_FILE: MSMg01no085_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:22 2005
(285 letters)
>mm_chr9_61231132_61231814
Length = 683
Score = 516 bits (267), Expect = e-151
Identities = 280/285 (98%), Gaps = 2/285 (0%)
Strand = Plus / Minus
Query: 1 ccccaccccacccccaagctcctggttctttctctccctctagagaacctggattctctg 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ccccaccc--cccccaagctcctggttctttctctccctctagagaacctggattctctg 426
Query: 61 tgagaaactccaaatctgctgacacctccattctcacccacataaaaacagggttgtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgagaaactccaaatctgctgacacctccattctcacccacataaaaacagggttgtcag 366
Query: 121 aaaccctccctaatcctgtgtggccctgggttttcgacttaatagtttaaggtgtctgca 180
||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||
Sbjct: 365 aaaccctccctaatcctgtatggccctgggtttttgacttaagagtttaaggtgtctgca 306
Query: 181 aagaaggggtctcttgagaagtggggtgagattcaagtgaaagaatggggtggaggaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aagaaggggtctcttgagaagtggggtgagattcaagtgaaagaatggggtggaggaaag 246
Query: 241 ctaaaggttacaggatacccctcccccattaggctatgacataaa 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctaaaggttacaggatacccctcccccattaggctatgacataaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 683
Length adjustment: 9
Effective length of query: 276
Effective length of database: 674
Effective search space: 186024
Effective search space used: 186024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
