Query= MSMg01no085_i03.b1 MSMg01no085_i03.b1 CHROMAT_FILE:
MSMg01no085_i03.b1 PHD_FILE: MSMg01no085_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:22 2005
(249 letters)
>mm_chr9_119216313_119216963
Length = 651
Score = 424 bits (219), Expect = e-123
Identities = 243/253 (96%), Gaps = 6/253 (2%)
Strand = Plus / Plus
Query: 1 acatgcagggaaaacatctatctacgtatcattaatattattaaaaatacttgctagata 60
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 201 acatgcagggaaaacatctatctacgtataaaaaatattattaaaaatacttgctagata 260
Query: 61 ttgccaaattaaagctctgaagccaagcatggaggtgcacaactatgtcagcactcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgccaaattaaagctctgaagccaagcatggaggtgcacaactatgtcagcactcaagc 320
Query: 121 agcacaagcaaaagactgagtcttaggccaggcccaaccacagtcagctcc--gt--gac 176
||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 321 agcacaagcaaaagactgagtcttaggccaggcccaaccacagtcagctccaggtcggcc 380
Query: 177 tcagctgcgtgagactcggtcaacaataaacggacaaagaaggaagggaggaaggaagga 236
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 t--gctgcgtgagactcggtcaacaataaacggacaaagaaggaagggaggaaggaagga 438
Query: 237 agggcagacggat 249
|||||||||||||
Sbjct: 439 agggcagacggat 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 651
Length adjustment: 9
Effective length of query: 240
Effective length of database: 642
Effective search space: 154080
Effective search space used: 154080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no085_i03.g1 MSMg01no085_i03.g1 CHROMAT_FILE:
MSMg01no085_i03.g1 PHD_FILE: MSMg01no085_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:22 2005
(333 letters)
>mm_chr9_119329798_119330530
Length = 733
Score = 582 bits (301), Expect = e-170
Identities = 322/329 (97%)
Strand = Plus / Minus
Query: 5 attatctagttgctctgtcagccccaggctgcacgccctcacgaacggtaagacagcaag 64
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 375 attatctagttgctctgtcagccccaggctgcacgccctcacaaacggtaagacagcaag 316
Query: 65 ggagcccgaggacaggagggccctaacctcaatttcacatctactggatccacccgagtc 124
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 315 gaagcccgaggacaggagggccctaacctcaatttcacatctactggatccaccggagtc 256
Query: 125 tctaaattacaggaatgggcaaggctgcagggatgagcaattcttactccctgtgtgtgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tctaaattacaggaatgggcaaggctgcagggatgagcaattcttactccctgtgtgtgc 196
Query: 185 aggagccatggaggctgtcagagtaggcatcagatcccctgggctggaggtacaggagtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aggagccatggaggctgtcagagtaggcatcagatcccctgggctggaggtacaggagtt 136
Query: 245 tgagagccaccagatgtgggtgccggcaacagagcttgggccctctggtgtccgcactct 304
|||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||
Sbjct: 135 tgagagccaccagatgtgggtgccgggaacagaacttgggtcctctggtgtccgcactct 76
Query: 305 tccctcccatccctgcacacgcagctccc 333
||||||||||||||||||||| |||||||
Sbjct: 75 tccctcccatccctgcacacgtagctccc 47
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
