Query= MSMg01no087_n22.b1 MSMg01no087_n22.b1 CHROMAT_FILE:
MSMg01no087_n22.b1 PHD_FILE: MSMg01no087_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:09 2005
(185 letters)
>mm_chr9_123179261_123179847
Length = 587
Score = 346 bits (179), Expect = e-100
Identities = 185/187 (98%), Gaps = 2/187 (1%)
Strand = Plus / Plus
Query: 1 tgacagaaggcagatgac-gtgatgtgtttgtggcttactctatcttgggatgactgctt 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacagaaggcagatgacagtgatgtgtttgtggcttactctatcttgggatgactgctt 260
Query: 60 tggctgctctgtgaacatgtcacaggccaaaag-aatcacttagaaggagtctgagttac 118
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 tggctgctctgtgaacatgtcacaggccaaaagaaatcacttagaaggagtctgagttac 320
Query: 119 agaagcaaatttaccctccaatcataatgctttcgtgtgtggtgctggggatggaaccca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagcaaatttaccctccaatcataatgctttcgtgtgtggtgctggggatggaaccca 380
Query: 179 gagccct 185
|||||||
Sbjct: 381 gagccct 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 587
Length adjustment: 8
Effective length of query: 177
Effective length of database: 579
Effective search space: 102483
Effective search space used: 102483
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_n22.g1 MSMg01no087_n22.g1 CHROMAT_FILE:
MSMg01no087_n22.g1 PHD_FILE: MSMg01no087_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:09 2005
(227 letters)
>mm_chr9_123256885_123257510
Length = 626
Score = 383 bits (198), Expect = e-111
Identities = 222/234 (94%), Gaps = 8/234 (3%)
Strand = Plus / Minus
Query: 1 acacttcccaaacctacccaaacagggccaccaactggagaccaagcattcaaatacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 acacttcccaaacctacccaaacagggccaccaactggagaccaagcattcaaatacctg 467
Query: 61 accctaaggagtccattctcattcaaactaccatt-------ttccacattagtacttgc 113
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 466 accctaaggagtccattctcattcaaactaccattggccattttccacattagtacttgc 407
Query: 114 tgacctgtgggctaagcctgtcattcattggccaaaacctcaggatcacctcctttgaaa 173
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 406 tgacctgtgggctaagcctgtcattcattggccaaaaactcaggatcacctcctttgaaa 347
Query: 174 ggagatatggctggtgttttttctggaagttgttaccaaacacctgggctttga 227
||||||| |||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggagata-ggctgggggcttttctggaagttgttaccaaacacctgggctttga 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 626
Length adjustment: 9
Effective length of query: 218
Effective length of database: 617
Effective search space: 134506
Effective search space used: 134506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
