Query= MSMg01no091_g11.b1 MSMg01no091_g11.b1 CHROMAT_FILE:
MSMg01no091_g11.b1 PHD_FILE: MSMg01no091_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:54 2005
(240 letters)
>mm_chr9_74230264_74230902
Length = 639
Score = 433 bits (224), Expect = e-126
Identities = 233/236 (98%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 5 gaattccttatgagctgcatattagtaaaattgtattcagatctgcagctgagtgcatcc 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattccttatgagctg-atattagtaaaattgtattcagatctgcagctgagtgcattc 263
Query: 65 ttaatgacaaatgactattgtgaagtgctgtctattttatctgccccctcaaaaggggct 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttaatgacaaatgactgttgtgaagtgctgtctattttatctgccccctcaaaaggggct 323
Query: 125 cctgtactcaggtgaggtcaggtgaaatcttaattaatcagttaagactagagcctgtga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctgtactcaggtgaggtcaggtgaaatcttaattaatcagttaagactagagcctgtga 383
Query: 185 ttggggcagtagaaggagggggtggagttgaaagttttagagaggggagagagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttggggcagtagaaggagggggtggagttgaaagttttagagaggggagagagagg 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_g11.g1 MSMg01no091_g11.g1 CHROMAT_FILE:
MSMg01no091_g11.g1 PHD_FILE: MSMg01no091_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:54 2005
(457 letters)
>mm_chr9_74292615_74293472
Length = 858
Score = 847 bits (438), Expect = 0.0
Identities = 453/458 (98%), Gaps = 1/458 (0%)
Strand = Plus / Minus
Query: 1 cacttgtctgtttgttttgatttcaataggcaatagatttgactaaataccaaagaatac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 658 cacttgtctgtttgttttgatttcaataggcaatagatttgactaaatacaaaagaatac 599
Query: 61 aaagaatacaacttttttt-aaaaattatttttgctaccatttcttttctgcaacaacgg 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aaagaatacaactttttttaaaaaattatttttgctaccatttcttttctgcaacaacgg 539
Query: 120 taaaaacctccaggatcaactactgaggtaacaactcctagtgatttttggtctagaatg 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 538 taaaaacctccaggatcaactactgaggtaacaactcccagtgatttttggtctagaatg 479
Query: 180 taccaggtacttgtttctgtaatttgtaagcagtgttgatatatgtctttaaataaatga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 taccaggtacttgtttctgtaatttgtaagcagtgttgatatatgtctttaaataaatga 419
Query: 240 cagtttccatccagagtccattgtcggaaacagtaagctcccacgccaatctagagaggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cagtttccatccagagtccattgtcggaaacagtaagctcccacgccaatctagagaggg 359
Query: 300 gttggttcgggaatgaaaggcattttgtagtgtgtcacacaagagcgatggtgtctcacc 359
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 358 gtcggttcgggaatgaaaggcattttgtagtgtgtcacacaagagtgatggtgtctcacc 299
Query: 360 gtgtgctttaaaacacgttggcgatactttatcttacaatgacacctgatggctcacacg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtgtgctttaaaacacgttggcgatactttatcttacaatgacacctgatggctcacacg 239
Query: 420 gctttctctcattcattatctgatttaatcctcgggat 457
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gctttctctcattcattatctgatttaatcctcgggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 858
Length adjustment: 10
Effective length of query: 447
Effective length of database: 848
Effective search space: 379056
Effective search space used: 379056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
