Query= MSMg01no092_i14.b1 MSMg01no092_i14.b1 CHROMAT_FILE:
MSMg01no092_i14.b1 PHD_FILE: MSMg01no092_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:25 2005
(245 letters)
>mm_chr9_36921325_36921969
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Minus
Query: 1 tcctgccccctcctcactctcagctgccaggtgtttggggagttaaaaatctcttttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcctgccccctcctcactctcagctgccaggtgtttggggagttaaaaatctcttttatt 386
Query: 61 atgaagtaaaatatttgaagtctgtaaatatatggccctcataatggaatttcactgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgaagtaaaatatttgaagtctgtaaatatatggccctcataatggaatttcactgtgg 326
Query: 121 tgaatttttccttctgtgatcttcattttcagtcctagctgaaattccctggtctctggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaatttttccttctgtgatcttcattttcagtcctagctgaaattccctggtctctggt 266
Query: 181 aaccatgactccagccccctgaatatattgtccagaaacccccctgacctgtataagaca 240
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 aaccatgactccggccccctgaatatattgtccagaaacccccctgacctggataagaca 206
Query: 241 gggag 245
|||||
Sbjct: 205 gggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_i14.g1 MSMg01no092_i14.g1 CHROMAT_FILE:
MSMg01no092_i14.g1 PHD_FILE: MSMg01no092_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:25 2005
(166 letters)
>mm_chr9_36756380_36756940
Length = 561
Score = 286 bits (148), Expect = 4e-82
Identities = 160/166 (96%), Gaps = 5/166 (3%)
Strand = Plus / Plus
Query: 1 ggtgggacacaccagtgttgaggctctctgctgaatagttcatgggaactgggggactgg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ggtgggacacaccagtgttgaggctctctgctgagtagttcatgggaactgggggactgg 260
Query: 61 tttaagtcttcggtgtgcagtatgcaaaaaaacaccaagaaaacaaagagtgggggaaag 120
||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 261 tttaagtcttcggtgtgcagtatgcaaaaaa-caccaagaaaaca----gtgggggaaag 315
Query: 121 ggtttaaagcagggcttctggaattgccataaaggagttctctcac 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggtttaaagcagggcttctggaattgccataaaggagttctctcac 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 561
Length adjustment: 8
Effective length of query: 158
Effective length of database: 553
Effective search space: 87374
Effective search space used: 87374
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
