Query= MSMg01no095_a02.b1 MSMg01no095_a02.b1 CHROMAT_FILE:
MSMg01no095_a02.b1 PHD_FILE: MSMg01no095_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:53 2005
(646 letters)
>mm_chr9_95882241_95883286
Length = 1046
Score = 926 bits (479), Expect = 0.0
Identities = 502/511 (98%), Gaps = 3/511 (0%)
Strand = Plus / Minus
Query: 139 ttgcattaa---aaaaaaaaaatcaataaactgtagggacaatctcctgtgttctgtgta 195
||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 1046 ttgcattaaaacaaaaaaaaaatcaataaaatgtaggggcaatctcctgtgttctgtgta 987
Query: 196 gaagcatcagtaaaaagctaatggccaataagcccaggcaggattagaagatgggacttc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gaagcatcagtaaaaagctaatggccaataagcccaggcaggattagaagatgggacttc 927
Query: 256 tggttgggaaagagtcaggagacattactgccccaaccaggaagaggaggagacagacaa 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 tggttgggaaagagtcaggagacattactgccccaaccaggaagaggaggagacagacaa 867
Query: 316 aagtagctgagaagaagaaaccagccctgaagctgagcttaggttagaataaatgggatg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 aagtagctgagaagaagaaaccagccctgaagctgagcttaggttagaataaatgggatg 807
Query: 376 ttaagctgagagttaatgggcagccagctagcttaaagcctaggcatttattaaaacgaa 435
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 806 ttaagctgagagttaatgggcagccagctagcttacagcctaggcatttattaaaacgaa 747
Query: 436 gcctctgagttgtgattcaggaactagagtgcagatggaaaagcacacaattataatcaa 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gcctctgagttgtgattcaggaactagagtgcagatggaaaagcacacaattataatcaa 687
Query: 496 aagtgaatggattagctgtcaaagatttgctaaaatggtgcattaactgaaaataaaaat 555
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aagtgaatgaattagctgtcaaagatttgctaaaatggtgcattaactgaaaataaaaat 627
Query: 556 ggtggtacatgtctttaatcctagtacttggcagaaggatatctgaattcagggccaact 615
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 626 ggtggtacatgtctttaatcctagcacttggcagaaggatatctgaattcagggccaact 567
Query: 616 tggtctacagaataagttctaggacagccag 646
||||||||||||||| |||||||||||||||
Sbjct: 566 tggtctacagaataaattctaggacagccag 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_a02.g1 MSMg01no095_a02.g1 CHROMAT_FILE:
MSMg01no095_a02.g1 PHD_FILE: MSMg01no095_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:53 2005
(289 letters)
>mm_chr9_95774055_95774743
Length = 689
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 caggccagccagccaggtttctacagtgagacctgtctcaaaataaacaaacaaccacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggccagccagccaggtttctacagtgagacctgtctcaaaataaacaaacaaccacag 260
Query: 61 agccaaacaaataaattaataagttctattttaatttccttaaattatatgtgccatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccaaacaaataaattaataagttctattttaatttccttaaattatatgtgccatgta 320
Query: 121 tatctaaatattcatatataaggcaacgtggagttgtttgcagtattttatttgctgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatctaaatattcatatataaggcaacgtggagttgtttgcagtattttatttgctgaca 380
Query: 181 gtgtttttaagtacaactttgttatatgatgtgtcaaactagaaaatactatctcacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtttttaagtacaactttgttatatgatgtgtcaaactagaaaatactatctcacttt 440
Query: 241 agctttcatagacaatctacatcatctttgtaagcatcttgattttcaa 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctttcatagacaatctacatcatctttgtaagcatcttgattttcaa 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
