Query= MSMg01no096_c24.b1 MSMg01no096_c24.b1 CHROMAT_FILE:
MSMg01no096_c24.b1 PHD_FILE: MSMg01no096_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:27 2005
(176 letters)
>mm_chr9_7668254_7668828
Length = 575
Score = 279 bits (144), Expect = 9e-80
Identities = 168/176 (95%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 1 gaaagtcaggtgctttgccaacatttgcaatttcaaatgtggagaggaaggtgtacctga 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 201 gaaagtcaggtgctttgccaacatttgcagtttcaaatgtggagaggaaggtgtacttga 260
Query: 61 aaacctacactgagtgtctctgcattgtgatatcactaagtcactggcaatgactcctag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 aaacctacactgagtgtctctgcattgtgatatcactaagtcactggcaatgactccttg 320
Query: 121 ctatatcctttaacctacattaaatgattacgcaaatgttgatgaataaaataagt 176
||||| ||||||| |||||||||||||||| |||||||||||||||| || |||||
Sbjct: 321 ctatagcctttaatctacattaaatgattaggcaaatgttgatgaatgaa-taagt 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 575
Length adjustment: 8
Effective length of query: 168
Effective length of database: 567
Effective search space: 95256
Effective search space used: 95256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no096_c24.g1 MSMg01no096_c24.g1 CHROMAT_FILE:
MSMg01no096_c24.g1 PHD_FILE: MSMg01no096_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:27 2005
(247 letters)
>mm_chr9_7817752_7818402
Length = 651
Score = 424 bits (219), Expect = e-123
Identities = 237/245 (96%), Gaps = 4/245 (1%)
Strand = Plus / Minus
Query: 1 taatcagctgtgtatgctttgtaagtaaagtattgggtgaagtcttcgtcagtatcaaaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 445 taatcagctgtgtatgctttgtaagtaaagtattgggtgaagacttcgtcagtatcaaaa 386
Query: 61 aattgagataaatctacatgaggatttacaagaaatagtttacgtgcctggtgtgtagg- 119
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 385 aattgagataaatctacatgagaatttacaagaaatagtttacgtgcctggtgtgtaggt 326
Query: 120 ---tgttaggattggaggttaggaaccagacagtgataagtacctttgtgcaccaaagta 176
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 gtttgttaggattggaggttaggaaccagacattgataagtacctttgtgcaccaaagta 266
Query: 177 tatatgacctgttccagatgtaggtctgataggcttgtgaagatttgaagtgttattttt 236
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 tatatgacctgttccagatgtaggtctgataggcttgtaaagatttgaagtgttattttt 206
Query: 237 ttttt 241
|||||
Sbjct: 205 ttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 651
Length adjustment: 9
Effective length of query: 238
Effective length of database: 642
Effective search space: 152796
Effective search space used: 152796
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
