Query= MSMg01no096_f02.b1 MSMg01no096_f02.b1 CHROMAT_FILE:
MSMg01no096_f02.b1 PHD_FILE: MSMg01no096_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:37 2005
(377 letters)
>mm_chr9_73021145_73021923
Length = 779
Score = 663 bits (343), Expect = 0.0
Identities = 370/379 (97%), Gaps = 2/379 (0%)
Strand = Plus / Plus
Query: 1 tacaaagttacataaggtgaccactgccac-cagtaattaaaata-aaatctgggacctg 58
|||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 201 tacaaagttatataaggtgaccactgccatacagtaattaaaatacaaatctgggacctg 260
Query: 59 aatttgggtaggctgactttagaccctgagctcttggctgcaaatctgtctcctgggcat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatttgggtaggctgactttagaccctgagctcttggctgcaaatctgtctcctgggcat 320
Query: 119 gctccgtactcatttgttcaccaggtagcaatgccatcttcacaggtacctcatgggcaa 178
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctccatgctcatttgttcaccaggtagcaatgccatcttcacaggtacctcatgggcaa 380
Query: 179 actgctggagcaggagagctaggcagcctggcttgcctgcaagtcagatggggccgagag 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 actgctggagcaggagagctaggcagcctggcttgcctgcaagtcagatggggctgagag 440
Query: 239 ggagtggctctctgtcccactgcagttaaagcagcaaagagaaaaccagccttggtttcc 298
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagtggctctctgtcccaatgcagttaaagcagcaaagagaaaaccagccttggtttcc 500
Query: 299 tgtccagagccagatgaataattttctggattgattccacctctttatttcctcatttat 358
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 tgtccagagccagatgaataattttctggattgattccacttctttatttcctcatttat 560
Query: 359 aaaggccaattttcttgat 377
|||||||||||||||||||
Sbjct: 561 aaaggccaattttcttgat 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 779
Length adjustment: 9
Effective length of query: 368
Effective length of database: 770
Effective search space: 283360
Effective search space used: 283360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_f02.g1 MSMg01no096_f02.g1 CHROMAT_FILE:
MSMg01no096_f02.g1 PHD_FILE: MSMg01no096_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:38 2005
(322 letters)
>mm_chr9_73171050_73171771
Length = 722
Score = 592 bits (306), Expect = e-173
Identities = 318/322 (98%)
Strand = Plus / Minus
Query: 1 tccaggaaacacgaacttttattaatgaacatctaggtgatcatcatgtcactgatatgt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 522 tccaggaaacacgaacttttattaatgaacatctaagtgatcatcatgtcactgatatgt 463
Query: 61 taaccacattatctcttcaaaaatttcgttaacagtcaattggttatgtaaagcaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 taaccacattatctcttcaaaaatttcgttaacagtcaattggttatgtaaagcaaaaaa 403
Query: 121 ttactatagagcagagtctgtaagagatttaaatttttgaattttaaaaaaggagggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttactatagagcagagtctgtaagagatttaaatttttgaattttaaaaaaggagggaga 343
Query: 181 aatgagatttgtagtcccacaagatacttatacataaaatgatagaatattattttaatt 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 342 aatgagatttgtagtcccacaagatacttatacatgaaatgatagaatattattttaatt 283
Query: 241 tttcctcaggtagagtgtgaaaactgtgaacattctaaacccatggtaagaactaaaaga 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tttcctcaggcagagtgtgaaaactgtgaacattctaaacccatggtaagaactaaaaga 223
Query: 301 tgtctaagaggtataattaata 322
|||| |||||||||||||||||
Sbjct: 222 tgtcaaagaggtataattaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
