Query= MSMg01no098_m16.b1 MSMg01no098_m16.b1 CHROMAT_FILE:
MSMg01no098_m16.b1 PHD_FILE: MSMg01no098_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:01 2005
(509 letters)
>mm_chr9_114637385_114638293
Length = 909
Score = 955 bits (494), Expect = 0.0
Identities = 503/506 (99%), Gaps = 2/506 (0%)
Strand = Plus / Plus
Query: 5 gaattctacatctctc-tctgaaggctgctagcagaatactggcttccaggcagctagga 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacatct-tcatctgaaggctgctagcagaatactggcttccaggcagctagga 263
Query: 64 tgagggtcttaacagcccacacccacagtgacacacctactccaacaaggtcacacttcc 123
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgagggtcttaaaagcccacacccacagtgacacacctactccaacaaggtcacacttcc 323
Query: 124 cccaacaaggccacacccagtttaacagagccacaccttctaatagtgccactccttagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cccaacaaggccacacccagtttaacagagccacaccttctaatagtgccactccttagg 383
Query: 184 ccgagcatacacaaaccatcacagcaactgacctacatctccagctctgtcttagtattt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccgagcatacacaaaccatcacagcaactgacctacatctccagctctgtcttagtattt 443
Query: 244 taggtcagtatacaaagcatggtttccatcctggcatttcacacatgtctcatctcatcg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taggtcagtatacaaagcatggtttccatcctggcatttcacacatgtctcatctcatcg 503
Query: 304 tgcttgggcctcattcatgccccaccccttcagctggctcccagtcttccctctgtttgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcttgggcctcattcatgccccaccccttcagctggctcccagtcttccctctgtttgc 563
Query: 364 aattctgttttcctgcgctccactgcctccagtctcatctccctctcatgaagtcctttc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aattctgttttcctgcgctccactgcctccagtctcatctccctctcatgaagtcctttc 623
Query: 424 tagtttcatgatatacaaacaccccatgtaaacacacaaacacacacactaagttgattt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagtttcatgatatacaaacaccccatgtaaacacacaaacacacacactaagttgattt 683
Query: 484 atcctgggactggagagatggctcag 509
||||||||||||||||||||||||||
Sbjct: 684 atcctgggactggagagatggctcag 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_m16.g1 MSMg01no098_m16.g1 CHROMAT_FILE:
MSMg01no098_m16.g1 PHD_FILE: MSMg01no098_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:01 2005
(339 letters)
>mm_chr9_114738760_114739498
Length = 739
Score = 578 bits (299), Expect = e-169
Identities = 329/339 (97%)
Strand = Plus / Minus
Query: 1 actctgctgattctgttctttaggaaatggaccaacaactctagtagtagccgcctttga 60
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 539 actctgctgattctgttctttaggaaatggaccgacaactctagtagtagctgcctttga 480
Query: 61 gggtgaccagggtggacagacactgtgtctttgtcccaagcacacggctctgcttcagtg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gggtgaccagggtggacagatactgtgtctttgtcccaagcacacggctctgcttcagtg 420
Query: 121 gaactcattgccgctatgtaaaaaccatctatcggaagatttagatttctttggaaaact 180
||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 419 gaactcattgctgccatgtaaaaaccatctatcagaagatttagatttctttggaaaacc 360
Query: 181 gaacagacgcacaatgccgagcctgtagtaattattttggatgcaggaaggacatgccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gaacagacgcacaatgccgagcctgtagtaattattttggatgcaggaaggacatgccct 300
Query: 241 ctgcacttttaacagatagttgggcaagcggtgggtgtcgaatcagaggccacaagtggc 300
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||
Sbjct: 299 ctgcacttttaacagatagttgggcaagcggcgggtgtcgaaacagaggccacaagtagc 240
Query: 301 ctagaccaggctaaaacctgtttttctcttttgacagtc 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ctagaccaggctaaaacctgtttttctcttttgacagtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
