Query= MSMg01no099_g09.b1 MSMg01no099_g09.b1 CHROMAT_FILE:
MSMg01no099_g09.b1 PHD_FILE: MSMg01no099_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:51 2005
(380 letters)
>mm_chr9_58919764_58920543
Length = 780
Score = 706 bits (365), Expect = 0.0
Identities = 377/381 (98%), Gaps = 2/381 (0%)
Strand = Plus / Plus
Query: 1 acatgtaggactgcctgtgaagattaacttcagtggaaaagaccagctgacacacctctc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatgtcggactgcctgtgaagattaacttcagtggaaaagaccagctgacacacctctc 260
Query: 61 ctgcacttgaaatcaaccctcagttgtgtgtagctgcctgccttgatgtacggagaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgcacttgaaatcaaccctcagttgtgtgtagctgcctgccttgatgtacggagaagca 320
Query: 121 acgggaggcactgtcattcggcattgcttgagcgcaattacgacttcttcgggttctacc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgggaggcactgtcattcggcattgcttgagcgcaattacgacttcttcgggttctac- 379
Query: 181 g-gttgtgatcagatgtgtttgggctaattcttgctgtcacttctctgcatctgctatgg 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagttgtgatcagatgtgtttgggctaattcttgctgtcacttctctgcatctgctatgg 439
Query: 240 actccatcgacttctctttttgtcccctgcccctttttcttttaagtgcctgtcttctct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 actccatcgacttctctttttgtcccctgcccctttttcttttaagtgcctgtcttctct 499
Query: 300 aggcactgtgggagggagttgcaaggaacggtcaaatagatcctttccagggctctcaat 359
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 aggcactgtgggagggagttgcaaggaacggtcaaatagatcctttcaagggctctcaat 559
Query: 360 accagtaatgtaagcagattg 380
|||||||||||||||||||||
Sbjct: 560 accagtaatgtaagcagattg 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_g09.g1 MSMg01no099_g09.g1 CHROMAT_FILE:
MSMg01no099_g09.g1 PHD_FILE: MSMg01no099_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:51 2005
(422 letters)
>mm_chr9_59068164_59068985
Length = 822
Score = 563 bits (291), Expect = e-165
Identities = 291/291 (100%)
Strand = Plus / Minus
Query: 132 agagagagagagagagagagaacagataaaaaagtgggcactagtatctttcatggctaa 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 agagagagagagagagagagaacagataaaaaagtgggcactagtatctttcatggctaa 712
Query: 192 aggaaccaaaaatcttcccattatctatctatctatctatctatctatctatctatctat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aggaaccaaaaatcttcccattatctatctatctatctatctatctatctatctatctat 652
Query: 252 ctatctatctatctatctatctatctatccacccacccctttactgtcttcctacctagt 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ctatctatctatctatctatctatctatccacccacccctttactgtcttcctacctagt 592
Query: 312 cttaccacctgtctaccatcaataacaaaacagttatgaacatcaagaaattcacagtct 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cttaccacctgtctaccatcaataacaaaacagttatgaacatcaagaaattcacagtct 532
Query: 372 agagaaccaacaatcacaatcaatagccatcataagactatcatttggtta 422
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agagaaccaacaatcacaatcaatagccatcataagactatcatttggtta 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
