XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTA
GTAATTATTCCTTGTGCAATTCGTGTAATTATAGCACACCTTACCATTGT
CCTTATGTGCTATTGCAGGAAGGTCACCTTCAACAGGATGATACTGGATG
ATGGCTGAATCAGGGGACCCTCTCACACCCGTGTTTAATCATAATCAAAA
AAGTGTTTAGGAGATATACCTTTATACACACACACACACACACACACACA
CACACACACACACACACACACACACATTGTGTACACTTTATCTCTTCCCT
CACTATCAAACTGGTGGATTCTTTTTCTTTGATTTTTAGTATTACATATA
TATGTAACAATGTATACATACATATTCAATATATATAAACACACACATAT
ATCCTAATATATCTTTCAAATGGTTCCCTATAACATTAAATTAGAAATTA
AGAACACTTAAGATTGTGCCTTGAGTACAATAGGCCCTAAAATTGTCCAA
GATAAAGAACCTGTCTTCTATTGAATGTGGTTACCATCGTTTACTCATCA
GCATGCATTATTTCACTAAATATAAGAAAGCACCTTGCCTGAGGATAATG
GGAACATTTAGCATGTTATCTCAGAATGCTGTTGTATTTATAGGAAAATT
TCAAAAGACAGCACCGAGTCCCCATAAGTCCCCCAGCAAATCTCCCTGGT
GTTACCA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXTCTTCCGAATTCCAGCCATCCAGGAAGGGGAAATTTATAGTTCCTTT
GGAGACTCAGTGGGAACCTGTGATGTTTTTCTGGAAGCTGTCTTATGAGA
GGATGTTTTTCTGAAGCAGACAAGCAAGATAAAGTTTTGATGGACTAGAC
ATGTGATGTTTTGCTGGAAGATGTCTTGTAAAGGGCATGTGATGCTTTGC
TGCCTGAGAGGGTGTGTGTTGTTCAGAAAGAATATAAATATAACCCCACA
GAGAGTGAGAGGTTGCTCTTGCATTGGTCTGCCTTGCTCTGATGATCTTT
GCTAATCTTAGCTTGTTGTTACTTCATAGAAAGAAACTCACCAGAGAACT
TGATATTCTGGATAGTTCTTGCTGCTTCTGAAGACTCTCACCAACTCAGC
TAAAGCATCTCATTTTCTGCTGGACCAAGCCACTGCTACCGATTCATGTT
AGATGTTTTGGACTGCTGCTAGTATCCTTACAAAGATTGGAATGGCCCCA
AAGAACTACTTCTGAACAAGTCCACCTACCCTGTTTCCTATTGACCTTTT
CCCCCCCTACTTCTGGTAGGAAGGCTAGAAGGAAGGTTAAAGCACTTAAG
AACCTTTTTACAGTAGTTTTTCTTTAAAAAAAATCTAAGCCTACCCTTCC
GAC

Query= MSMg01no102_a20.b1 MSMg01no102_a20.b1 CHROMAT_FILE:
MSMg01no102_a20.b1 PHD_FILE: MSMg01no102_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:30 2005
         (530 letters)



>mm_chr9_84853858_84854787
          Length = 930

 Score =  735 bits (380), Expect = 0.0
 Identities = 393/402 (97%), Gaps = 8/402 (1%)
 Strand = Plus / Minus

                                                                       
Query: 129 atcaaaaaagtgtttaggagatatacctttatacacacacacacacacacacacacacac 188
           ||||||||||||||||||||||||||||||||        ||||||||||||||||||||
Sbjct: 930 atcaaaaaagtgtttaggagatatacctttat--------acacacacacacacacacac 879

                                                                       
Query: 189 acacacacacacacacacacacattgtgtacactttatctcttccctcactatcaaactg 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 acacacacacacacacacacacattgtgtacactttatctcttccctcactatcaaactg 819

                                                                       
Query: 249 gtggattctttttctttgatttttagtattacatatatatgtaacaatgtatacatacat 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gtggattctttttctttgatttttagtattacatatatatgtaacaatgtatacatacat 759

                                                                       
Query: 309 attcaatatatataaacacacacatatatcctaatatatctttcaaatggttccctataa 368
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 attcaatatatatgaacacacacatatatcctaatatatctttcaaatggttccctataa 699

                                                                       
Query: 369 cattaaattagaaattaagaacacttaagattgtgccttgagtacaataggccctaaaat 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 cattaaattagaaattaagaacacttaagattgtgccttgagtacaataggccctaaaat 639

                                                                       
Query: 429 tgtccaagataaagaacctgtcttctattgaatgtggttaccatcgtttactcatcagca 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tgtccaagataaagaacctgtcttctattgaatgtggttaccatcgtttactcatcagca 579

                                                     
Query: 489 tgcattatttcactaaatataagaaagcaccttgcctgagga 530
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tgcattatttcactaaatataagaaagcaccttgcctgagga 537


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 85
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space:   478400
Effective search space used:   478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)