Query= MSMg01no102_b21.b1 MSMg01no102_b21.b1 CHROMAT_FILE:
MSMg01no102_b21.b1 PHD_FILE: MSMg01no102_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:36 2005
(445 letters)
>mm_chr9_28545440_28546284
Length = 845
Score = 845 bits (437), Expect = 0.0
Identities = 443/445 (99%)
Strand = Plus / Minus
Query: 1 ttttcagaaacacacatctcagctgagcctcctgcacagatgtcagatttctgcagaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ttttcagaaacacacatctcagctgagcctcctgcacagatgtcagatttctgcagaagc 586
Query: 61 ctcccggaggctcagagagcccacaatggactatttttagttctgataattaatattgga 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctcccggaggctcagagagcctacaatggactatttttagttctgataattaatattgga 526
Query: 121 ggagaaagggaggaggatgaaaatgtagctccagcaaaaaaggcaattaccatctatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggagaaagggaggaggatgaaaatgtagctccagcaaaaaaggcaattaccatctatccc 466
Query: 181 atatattgtcacctatgagatgtgttggtttcaaagaaataataaagagaaatgcgcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atatattgtcacctatgagatgtgttggtttcaaagaaataataaagagaaatgcgcatg 406
Query: 241 aacccattgctttctgtatcacacctcccatgaagtagatgtttaattcttccctttctg 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 405 aacccattgctttctgtatcacacctcccatgaagtggatgtttaattcttccctttctg 346
Query: 301 aattctggaaatagcttggtctcataagttaacacttgcagctagggctgtgccagcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aattctggaaatagcttggtctcataagttaacacttgcagctagggctgtgccagcctg 286
Query: 361 cattttactatgacaaagactgtgtctgtttcccaatgttgaaaaataagagctcgcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cattttactatgacaaagactgtgtctgtttcccaatgttgaaaaataagagctcgcttc 226
Query: 421 tctcacacattcccagtgaattggg 445
|||||||||||||||||||||||||
Sbjct: 225 tctcacacattcccagtgaattggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_b21.g1 MSMg01no102_b21.g1 CHROMAT_FILE:
MSMg01no102_b21.g1 PHD_FILE: MSMg01no102_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:36 2005
(469 letters)
>mm_chr9_28452140_28453010
Length = 871
Score = 837 bits (433), Expect = 0.0
Identities = 461/471 (97%), Gaps = 2/471 (0%)
Strand = Plus / Plus
Query: 1 actgctaagagaacagacacaggcatagatagaaggagctagacaatccaataaagacca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 actgctaagagaacagacacaggcatagatagaaggagctagacaaaccaataaagacca 260
Query: 61 gtaggcttcaggttgtctttttcttt--tctctctctctctatctgcaagtattaacatg 118
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 261 gtaggcttcaggttgtctttttcttttctctctctctctctctctgcaagtattaacatg 320
Query: 119 tatgtggatgtgtgctgtgtgtttgtttgcatttatacatatgacacacacataagtgtg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtggatgtgtgctgtgtgtttgtttgcatttatacatatgacacacacataagtgtg 380
Query: 179 gcattcagagaactacttgcaggagttggtttcctgcttatcatgtagcttctggatatc 238
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 381 gcattcagagaactacttgcaggagttggtttcctgctgatcatgtagtttctggatatc 440
Query: 239 aagttcaggtatttaggtttggcagcaagtgtcttcacccattgcactatcttgttgacc 298
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 aagttcaggtagttaggtttggcagcaaatgtcttcacccattgcactatcttgttgacc 500
Query: 299 cagatgatttgttttctactaagaccataacctagactttaagtggtctagtgagcccct 358
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagatgatttattttctactaagaccataacctagactttaagtggtctagtgagcccct 560
Query: 359 agtcagctcactagaaggtttgcctagggagcggccacagggggggcaggcgtgaaggca 418
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 agtcagctcactagaaggtttgcctagggagcagccacagggggggcaggcgtgaaggca 620
Query: 419 tgagacatgcatggactttctttcctaattgagtacaggctagttcaatca 469
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagacatgcatggactttctttcctaattgagtacaggctagttcaatca 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 871
Length adjustment: 10
Effective length of query: 459
Effective length of database: 861
Effective search space: 395199
Effective search space used: 395199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
