Query= MSMg01no102_e15.b1 MSMg01no102_e15.b1 CHROMAT_FILE:
MSMg01no102_e15.b1 PHD_FILE: MSMg01no102_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:50 2005
(243 letters)
>mm_chr9_59064066_59064708
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Minus
Query: 1 gaattagtttagtcaggtaactcacaaggcaaaacctacaaggttatgtacttaccacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaattagtttagtcaggtaactcacaaggcaaaacctacaaggttatgtacttaccacct 384
Query: 61 tagttcaacttggggcaagaatacatcctggcatatttcctgcctatatctcccaactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tagttcaacttggggcaagaatacatcctggcatatttcctgcctatatctcccaactgt 324
Query: 121 gtgtgatcaagcatatcctctgtggttgggacaaccaaccttgtttactgaagtgagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtgtgatcaagcatatcctctgtggttgggacaaccaaccttgtttactgaagtgagaac 264
Query: 181 acatggcttgttagcttacatgaataacagagcccagcattccaggaagttatctatctt 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 263 acatggcttgttagcttacatgaataacagaccccagcattccaggaagttatctatctt 204
Query: 241 tgg 243
|||
Sbjct: 203 tgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_e15.g1 MSMg01no102_e15.g1 CHROMAT_FILE:
MSMg01no102_e15.g1 PHD_FILE: MSMg01no102_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:50 2005
(231 letters)
>mm_chr9_58911174_58911809
Length = 636
Score = 391 bits (202), Expect = e-113
Identities = 226/238 (94%), Gaps = 9/238 (3%)
Strand = Plus / Plus
Query: 1 aattcttttaa-aatttcccgttctaaactaagaaacattttttgccaaa------aaac 53
||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 aattcttttaacaatttcccgttctaaactaagaaacattttttgccaaaaaaaataaa- 259
Query: 54 cataaaataaaataaagagctggaagctgcaaaggcttgggacggtattaaacagtgctg 113
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 260 -ataaaataaaataaagagctggaagctacaaaggcttgggacggtattaaacagtactg 318
Query: 114 ttttttgtttgtttgtttgtttatttttggtttttttttttacttttgaaagtgtgccag 173
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 319 ttttttgtttgtttgtttgtttatttttggttttttttttaacttttgaaagtgtgccag 378
Query: 174 aatattgtcttctctgggttatggtttttccctttccccatcacttaccaattgagaa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aatattgtcttctctgggttatggtttttccctttccccatcacttaccaattgagaa 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 636
Length adjustment: 9
Effective length of query: 222
Effective length of database: 627
Effective search space: 139194
Effective search space used: 139194
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
