Query= MSMg01no102_f22.b1 MSMg01no102_f22.b1 CHROMAT_FILE:
MSMg01no102_f22.b1 PHD_FILE: MSMg01no102_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:56 2005
(132 letters)
>mm_chr9_49977266_49977800
Length = 535
Score = 215 bits (111), Expect = 1e-60
Identities = 128/135 (94%), Gaps = 3/135 (2%)
Strand = Plus / Minus
Query: 1 aaggaaaaccatgttgggacaactgcctagctgtacctggaacatggctgtgccttctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aaggaaaaccatgttgggacaactgcctagctgtacctggaacatggctgtgccttctca 276
Query: 61 ttaatatattttataggtctgccaagtattctgcattacacccattttttt---caatag 117
| ||||||||||||||||||||||||||||| | ||||||||||||||||| || |||
Sbjct: 275 tgaatatattttataggtctgccaagtattcagtattacacccattttttttttcagtag 216
Query: 118 gaaacctgatactca 132
|||||||||||||||
Sbjct: 215 gaaacctgatactca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 535
Length adjustment: 8
Effective length of query: 124
Effective length of database: 527
Effective search space: 65348
Effective search space used: 65348
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_f22.g1 MSMg01no102_f22.g1 CHROMAT_FILE:
MSMg01no102_f22.g1 PHD_FILE: MSMg01no102_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:56 2005
(250 letters)
>mm_chr9_49830999_49831648
Length = 650
Score = 429 bits (222), Expect = e-125
Identities = 243/250 (97%)
Strand = Plus / Plus
Query: 1 gcttttgggaaagatgtggttgatgtagaagccctacattttcctttgtgacctttgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttttgggaaagatgtggttgatgtagaagccctacattttcctttgtgacctttgagg 260
Query: 61 aataaggccacaagcaaagggcaatgagagcactgggaaggaatatggagggtgacctca 120
|| ||||||||||||||| ||||||||||||||| |||||||||| ||||| || |||||
Sbjct: 261 aacaaggccacaagcaaacggcaatgagagcactaggaaggaatacggaggatggcctca 320
Query: 121 tttaccaaggtaatcaatgcatgtcatagctccctatgtcttagagttagaggtagtatg 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttacccaggtaatcaatgcatgtcatagctccctatgtcttagagttagaggtagtatg 380
Query: 181 tatcaagccttccaagttccccaggaaagtctgtcctccataaaacactctatctttact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcaagccttccaagttccccaggaaagtctgtcctccataaaacactctatctttact 440
Query: 241 cttctcagga 250
||||||||||
Sbjct: 441 cttctcagga 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
