Query= MSMg01no103_c22.b1 MSMg01no103_c22.b1 CHROMAT_FILE:
MSMg01no103_c22.b1 PHD_FILE: MSMg01no103_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:01 2005
(236 letters)
>mm_chr9_42521634_42522270
Length = 637
Score = 426 bits (220), Expect = e-124
Identities = 233/238 (97%), Gaps = 3/238 (1%)
Strand = Plus / Minus
Query: 1 cccatttgcccactc--caacacatcatgctttttctcggggtattcacaaggcgctttt 58
||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 437 cccatttgcccactctgc-acacatcatgctttttctcggggtattcacaaggcgttttt 379
Query: 59 attatcacttggctcagcttctgccctcctttgccattggttttccttagagatccacct 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 attatcacttggctcagcttctgccctcctttgccattggttttccttagagatccacct 319
Query: 119 ggcaggctacaatggcgtgtccaggagacattccgatgaaggcatctctcattttgactg 178
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 318 ggcaggctacaatggcgtgtccaggagacattccgatgtaggcatctctcattttgactg 259
Query: 179 agaatctgtgcacccaaggccctcttaagagtgttaataacatttacggaacgtgaca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agaatctgtgcacccaaggccctcttaagagtgttaataacatttacggaacgtgaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 637
Length adjustment: 9
Effective length of query: 227
Effective length of database: 628
Effective search space: 142556
Effective search space used: 142556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no103_c22.g1 MSMg01no103_c22.g1 CHROMAT_FILE:
MSMg01no103_c22.g1 PHD_FILE: MSMg01no103_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:01 2005
(289 letters)
>mm_chr9_42365151_42365839
Length = 689
Score = 516 bits (267), Expect = e-151
Identities = 282/287 (98%)
Strand = Plus / Plus
Query: 1 cagtgcgcatcagtgccttacaactcttgaaaacaaaatccccttggagataaactacta 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 cagtgcgcatcagtgccttacaactcttgaaaacaaaacccccttggagataaactacta 260
Query: 61 gactaaacaccaaacttctcattaaaaagaaatgagttaatttgccaggggactcatacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactaaacaccaaacttctcattaaaaagaaatgagttaatttgccaggggactcatacg 320
Query: 121 ccttgaactctgttcagatcctgtcacatgactaccaactttgaagcatcaaagatgaag 180
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttgaactccgcccagatcctgtcacatgactaccaactttgaagcatcaaagatgaag 380
Query: 181 ccaccccagattctaaaggtccaaccatgagtgcatggcttagaatcccatctggtccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaccccagattctaaaggtccaaccatgagtgcatggcttagaatcccatctggtccca 440
Query: 241 ggcaaggatcgatcctggtgctttctcgggtggatggtgtgatgatg 287
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ggcaaggatcgatcctggtgctttctcgggtggatagtgtgatgatg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
