Query= MSMg01no108_b16.b1 MSMg01no108_b16.b1 CHROMAT_FILE:
MSMg01no108_b16.b1 PHD_FILE: MSMg01no108_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:50 2005
(602 letters)
>mm_chr9_97280056_97281057
Length = 1002
Score = 1131 bits (585), Expect = 0.0
Identities = 594/597 (99%)
Strand = Plus / Plus
Query: 6 gaattctacctctagacctgcaggcagcaggaaggaagaatgaaccactgggcctagatt 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctacctctagatctgcaggcagcaggaaggaagaatgaaccactgggcctagatt 265
Query: 66 aagcttctgaaacttcaaagctcaccccagtaacagagatagtcaaacaaggccacaccc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aagcttctgaaacttcaaagctcaccccagtaacagagatagtcaaacaaggccacaccc 325
Query: 126 actctaacaaggccacatctcccaatagcgccactcactgggagcctgtgggggccattt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 actctaacaaggccacatctcccaatagcgccactcactgggagcctgtgggggccattt 385
Query: 186 tcattcaaaccaccacactattgtatatttgtgaacaacatagaccttactataatacat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcattcaaaccaccacactattgtatatttgtgaacaacatagaccttactataatacat 445
Query: 246 aaggggagaatggacagtagagatgggaatgctaaggaaaggtatgtccttgtaatgttg 305
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aaggggaaaatggacagtagagatgggaatgctaaggaaaggtatgtccttgtaatgttg 505
Query: 306 cataagctaaaagacataaactgatagagagatcagaggtctcaggtcaaggtggtggca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cataagctaaaagacataaactgatagagagatcagaggtctcaggtcaaggtggtggca 565
Query: 366 ggccacattctctatcaggctccaagggaagtatttggtccaagctccttgtcttctaat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ggccacattctctatcaggctccaagggaagtatttggtccaagctccttgtcttctaat 625
Query: 426 ttattaattttaagctagtatctaaaataatgctacgtgtatactatcagaacatagtca 485
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttattaattttaagctagcatctaaaataatgctacgtgtatactatcagaacatagtca 685
Query: 486 aaagaatgaacccccttgctttagaaaatatagaaggggagatgtcagaatacaattaac 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aaagaatgaacccccttgctttagaaaatatagaaggggagatgtcagaatacaattaac 745
Query: 546 aggatgacatatggtgaacaatgccccgtggaactgtgagagagactccaggaaata 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aggatgacatatggtgaacaatgccccgtggaactgtgagagagactccaggaaata 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_b16.g1 MSMg01no108_b16.g1 CHROMAT_FILE:
MSMg01no108_b16.g1 PHD_FILE: MSMg01no108_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:50 2005
(495 letters)
>mm_chr9_97436091_97436984
Length = 894
Score = 855 bits (442), Expect = 0.0
Identities = 466/474 (98%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 1 ttagcatctagtggctccagggactgtcacagagaactccaaagaagcagcgtaagcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ttagcatctagtggctccagggactgtcacagagaactccaaagaagcagcgtaagcata 614
Query: 61 cttggatgtgcaaatgctgccataccatgtctacaagtgacatgtcttattttcccacag 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 613 cttggatgtgcaaatgctgccataccatgtctacaagtgacatgtcttgttttcccacag 554
Query: 121 ctttcccatgggatcctttaggaagaagagatgaaagaactttgggtggaagtgaatcct 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 553 ctttcccatgggatcctttaggaagaagagatgagagaactttgggtggaagtgaatcct 494
Query: 181 cctcagattgtttaagtgtaacaagaaatacattcaatctgttaagtccgtgaaagtctg 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cctcagattgtttaagtgtgacaagaaatacattcaatctgttaagtccgtgaaagtctg 434
Query: 241 taccatctggttatatgtctcatgttctccagcagcaacatctgcaggacagggaagagg 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 433 taccatctggttatatgtctcgtgttctccagcagcaacatctgcaggacagggaagagg 374
Query: 301 gactgccatttccctccacagaagatactggcgtgctcaagcggcctcagtgtgcctctc 360
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 373 ggctgccatttccctccacagaagatactggcgtgc-caagcggcctcagtgtgcctctc 315
Query: 361 tgggagcagacacatatatagagactagttatcccataggactgggatggtcatcttagc 420
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 314 tgggagcagacacatgtatagagactaggtatcccataggactgggatggtcatcttagc 255
Query: 421 tgactggtctttggatcatctgtatgtcacagctgcacctgtctcttgttagtc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgactggtctttggatcatctgtatgtcacagctgcacctgtctcttgttagtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 894
Length adjustment: 10
Effective length of query: 485
Effective length of database: 884
Effective search space: 428740
Effective search space used: 428740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
