Query= MSMg01no109_m22.b1 MSMg01no109_m22.b1 CHROMAT_FILE:
MSMg01no109_m22.b1 PHD_FILE: MSMg01no109_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:09 2005
(642 letters)
>mm_chr9_81959166_81960206
Length = 1041
Score = 1098 bits (568), Expect = 0.0
Identities = 611/632 (96%), Gaps = 12/632 (1%)
Strand = Plus / Plus
Query: 21 tactgcaaagaaaatggaagtttagtctttatgaacattgctgctgagtgatttaattta 80
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 221 tactgcaaagaaaatggaagtttagtctttataaacattgctgctgagtggtttaattta 280
Query: 81 tcatatgtctcaaaaaccacctcaaccaacaagcacaaggcctcaaatattctgtatctg 140
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 281 tcatatgtctcaaaaaccacctcaaccaacaagcacaaggtctcaaatattctgtatctg 340
Query: 141 ctttattcaaaaacgtttgatttctgttggggaattatgaaaaatattaaattggagaaa 200
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctttattcaaaaacttttgatttctgttggggaattatgaaaaatattaaattggagaaa 400
Query: 201 cctttttctctttatactgtagaaaattacggatgctttagatttttacaatttctattt 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 401 cctttttctctttatactgtagaaaattatggatgctttagatttttacaatttctattt 460
Query: 261 tattttggtataacactgatcacaaaaggaacacaatcaactctacctcagtgaaagccc 320
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tattttggtataacattgatcacaaaaggaacacaatcaactctacctcagtgaaagccc 520
Query: 321 atgaaatatttcgcaataataatacaaataattaaataacccagtgtgaacatgctaaat 380
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 521 atgaaatatttcgcaataataatacaaataattaaataacccagtgggaacatgctaaat 580
Query: 381 agaattattttaaccaagtgtccttggcatgtctttgcttttttaccccttatggcacac 440
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 581 agaattattttaaccaagtgcccttggcatgtctttgcttttttaccccttatggcacac 640
Query: 441 acctatccctttaacttctagtacatggacttaatttttatttagagttactaattctag 500
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 641 acctatccctttaacttctagtacatggacttaatttttatttagagttcctaattctag 700
Query: 501 tgaactaacaattttctttaaaattaagtttgttttaatttagcacatcgtttctttttt 560
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 701 tgaactaacaattttctttaaaattaagtttgttttaatttagcacatcgttt--ttttt 758
Query: 561 tgttgttgttgttgtgactataatgtgtctgtgtctt----------tttttttttacaa 610
||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 759 tgttgttgttgttgtgactataatgtgtctgtgtcttcttttttttttttttttttacaa 818
Query: 611 agtatcatatgttggtaaggttttctattttg 642
||||||||||||||||||||||||||||||||
Sbjct: 819 agtatcatatgttggtaaggttttctattttg 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no109_m22.g1 MSMg01no109_m22.g1 CHROMAT_FILE:
MSMg01no109_m22.g1 PHD_FILE: MSMg01no109_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:10 2005
(245 letters)
>mm_chr9_82085705_82086349
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Minus
Query: 1 agtgagaacgccctcccataggctcatatgtttgaatacttgaccccaagtttgtggatc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agtgagaacaccctcccataggctcatatgtttgaatacttgaccccaagtttgtggatc 510
Query: 61 tgtttgggaaggattaggtatgtcctgttgaaggagttgtcacctgaagtggtcttcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tgtttgggaaggattaggtatgtcctgttgaaggagttgtcacctgaagtggtcttcagg 450
Query: 121 tgtctctctgtacagtgcttgcccaggatacctacaattagctagacaaagagtctggaa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 449 tgtctctctgtacagtgcttgcccaggatacctacaattagctggacaaagagtctggaa 390
Query: 181 gttttggttccagtgatgactgatttaaacctttcaagctctcagctacaacaccagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gttttggttccagtgatgactgatttaaacctttcaagctctcagctacaacaccagcac 330
Query: 241 cacac 245
|||||
Sbjct: 329 cacac 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
