CTATGGGCCTATAGACTACTATAGGGAGAGGATCCGCGGAATTCCAATCA
GGCAGCTTCCTTTAAAGTTGAGAGTCCAGCAAGCTGTTCTCTATGAGCAT
CGAGACCTTTACTTTCTGGGTGCCTCCCCCAGTAACTCTGGGGCCTTAAA
TTTACCCCCTAAGCCCAGCATCATTTAACTCCAGCAGGAGGTGGGGCTTG
GGGACAACCTGTGTCTCTATCATGGGATGTATAAGCCTGTGTCCCATCTC
TCGAATTTGTAGTAGTAAAACTTATGAAGTTGGTGTATGCTCACATAGAT
GTGTCTGCTGTGGTACCAAGTAGCTCCTTCAATCCCTCTTCCTGCCATAT
GGATGAGGTTCTGTCTTGTATTCCTGGCACCTGTGGTTCTGATCCATGAC
ATTACAGAATAGCTACCATGCCTACAACCTTACAAAAACAACCTGGTAAA
CACTGTCTCTAGCTAACAATAAAAGACAAGCTATACTTAATAGGCTAATA
AAGAAAATACTAGCTCTGGCATTGGGAGTGATCTTTTCAAATCACGGTAA
GCAATCACCCAGCACAGCTCTTGGCTTCTTGTTCTTCAAGTCATGTTCAA
GGCATGGTCAGTGGTCTAGGACACAGACAGCTTATCCTAACAGGCAACAT
GTCCCAGTCCAAACCTCAAGGTGGTTTCTCTGGCTGTGACAGTGGCATCT
ATAGAGCTGTCAGTCCTGATGGTGATGGTGAACTGGGGCCATACCTGCAA
GATAAGACTGGTACTCTCCCACATCTTGGGGCCCGTACACTCATCCTTTC
TCAGAAGTGTTTAGTGTTTGTTGCCCTGGCAATATAAAAGGCAGACTTGC
TAAACATAGAGCAGGCAAGCAATGCCTAGAATAGCCCAGAAGATAAAACA
TCCTTTACATGTGTACACTACCCGTAGACCCACAAAAGCCTACCCTGGAG
CCCCAGCCTCCGGGGTAAAACTTTCTGAACTTTGGGTTGGGTTGGTTGAA
CCTTTGGGTTCCTTAACGAAAAAAAATCCAGGTTAAAAGTGTGTATGGTT
AACAAACCCAAATTGGGTTCTCCTAAAGGGAACCAATACATATAACTTGT
CCTTGGGAAAACATTCCA

TATACATGCGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCCCTTTAAAGGACCCAGGGAATTTAGAATTAAGGCACC
AGTACATTTAGTTCCTGGTGAAGATCTGCTTCCTGGCAAGCCCCAGGTCT
TCACTTAGAAACAAGGACTTGCAGCTATTGGATGGGTCACACGGCCCCCA
ATGGAGGAGCTAGAGAAAGTACCTAAGGAGCTAAAGGGAACTGCAACCCT
ATATGTGGAACAACAATATGAACTAACCAGTACCCTGGAGCTCTTGTCTC
TAGCTGCATATGTATCAAAAGATGGCCTAGTCAGCCATCACTGGAAAGAG
AGGCCCTTTGGACTTGCAAACTTTATATGCCCCAGTATAGGGGAATGCCA
GGGCCAAAAGGGGGGAATGGTTGGATAGGGAATTGGGGGGTGGTTTCCCC
CCCCCCTCCTTTCTTTCTCTTCTTTCTTTATATATTACTTATTTTTATTT
TTTTTTTTTTTTTCTTTCCCTTTTTCTCCACTCTTTTCTTTTTAATTTCA
TTCTCTTCTTTCTTATTCCTTTCCTTTCTTACTTTTACTTTACTATCACT
TTCCTTTCTCCTTTTCTTTATATTTTTCCCTCTTCTCTATTCTCTTCCTT
TTTCCTCTTTTCATATACACTTTTTTTATATTACCCTTTTCCCTCCCCCT
TCTCTCTCTATCTTCCTTACCTTTTCTACTCTTCATTTACTCTACTCCCC
CTTTCTCTTTCTTCTTTCTCTTCTCTCTTCTTTTCCTTTCTCTTCTTTTC
TTCTCTTTCCTCTACTTTATTTCTCTTTCTCAACCTCTCTCTTCCTATTC
CCCTTTTCTTTCTATACATACTTATTTCTATCCCCCTATTTTTCACTTCC
TCTCCTCTTCTCTCTTTTCCTCTTTTCCTTTTCTTCATATTCTTCCTATT
ACTCTCTTTCTCTCCTCTCTCTTCACTTTTCTTCCTCACTTCTCTCCTTT
CTCTCTCTCCTTCCTCAATTCTTCTTATCCTTATTTTACTTCCCTTCTTC
TTTTTATCATCCCTCTTTATTCTCCTTTACCTCTTTCACATTATCTTTTA
TTTCTCCTTCTCTTTCTTCTCCTTATAATTCTCTTCTTATTCTTTTATTA
TCCCTATTTATTTTTTATATTCTCCTTATTCTTTCTATCTCTTCTATTCC
TATTCCTCGTTCCCCTCTACTCTTTCCTCTCCTTCTCTACCTTCCTCTTA
TCATTCTTTTACACCATTCCCCCTCTCTTCTATCTCTCAATTCTCCCCTC
ACTCTTTACCTTTCCTACCATCTCTTTTTTTC

Query= MSMg01no111_j02.b1 MSMg01no111_j02.b1 CHROMAT_FILE:
MSMg01no111_j02.b1 PHD_FILE: MSMg01no111_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:04 2005
         (640 letters)



>mm_chr9_25395461_25396499
          Length = 1039

 Score =  667 bits (345), Expect = 0.0
 Identities = 612/841 (72%), Gaps = 214/841 (25%)
 Strand = Plus / Plus

                                                                       
Query: 12  gctgttctctatgagcatcgagacctttactttctgggtgcctcccccagtaactctggg 71
           |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1   gctgttctctatgagcattgagaccttttctttctgggtgcctcccccagtaactctggg 60

                                                                       
Query: 72  gccttaaatttaccccctaagcccagcatcatttaactccagcaggaggtggggcttggg 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61  gccttaaatttaccccctaagcccagcatcatttaactccagcaggaggtgggccttggg 120

                                                                       
Query: 132 gacaacctgtgtctctatcatgggatgtataagcctgtgtcccatctctcgaatttgtag 191
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 gacaacctgtgtctctatcatgggatgtataagcctgtgtcccatctctcaaatttgtag 180

                                                                       
Query: 192 tagtaaaacttatgaagttggtgtatgctcacatagatgtgtctgctgtggtaccaagta 251
           ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 tagtaaaacttataaagttggtgtatgctcacattgatgtgtctgctgtggtaccaagta 240

                                                                       
Query: 252 gctccttcaatccctcttcctgccatatggatgaggttctgtcttgtattcctggcacct 311
            ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 241 actccttcaatccctcttcctgccatattgatgaggttctgtcttgtattcctggcacct 300

                                                                       
Query: 312 gtggttctgatccatga------------------------------------------- 328
           |||||||||||||||||                                           
Sbjct: 301 gtggttctgatccatgagttggccaggattatctttaaaccgaacaatacatttaatttt 360

                                                                       
Query: 328 ------------------------------------------------------------ 328
                                                                       
Sbjct: 361 taaataatttgtcctggctctagctaactggaacaggcagccacatagctgaaaagcagg 420

                                                                       
Query: 328 ------------------------------------------------------------ 328
                                                                       
Sbjct: 421 ctggtatttttgctggtgctatttttttttttttttgagaaagagtcttgctatgtggcc 480

                                                                       
Query: 329 ------------------------------------------------cattacagaata 340
                                                           ||||||||||||
Sbjct: 481 tacatagtgaactttccagtcctgccccctcacctccccaagtacaggcattacagaata 540

                                                                       
Query: 341 gctaccatgcctacaaccttacaaaaacaacctggtaaacactgtctctagctaacaata 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctaccatgcctacaaccttacaaaaacaacctggtaaacactgtctctagctaacaata 600

                                                                       
Query: 401 aaagacaagctatacttaataggctaataaagaaaatactagctctggcattgggagtga 460
           ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 601 aaagaca-gctatatttaataggctaataaagaaaatactatctctggcattgggagtga 659

                                                                       
Query: 461 tcttttcaaatcac-ggtaagcaatcacccagcacagctcttggcttcttgttcttcaag 519
           || ||||||||||| || ||| ||||| |||||||||| |||||||||||||||||||||
Sbjct: 660 tcgtttcaaatcactgg-aagtaatcatccagcacagcccttggcttcttgttcttcaag 718

                                                                       
Query: 520 tcatgttcaaggcatggtcagtggtctaggacacagacagcttatcctaacaggcaacat 579
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 719 tcatgttcaaggcatggtcagtggtctaggacacagacagcttatcctcacaggcaacat 778

                                                                       
Query: 580 gtcccagtccaaacctcaaggtggtttctctggctgtgacagtggcatctatagagctgt 639
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gtcccagtccaaacctcaaggtggtttctctggctgtgacagtggcatctatagagctgt 838

            
Query: 640 c 640
           |
Sbjct: 839 c 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1039
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1029
Effective search space:   648270
Effective search space used:   648270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)