Query= MSMg01no113_c20.b1 MSMg01no113_c20.b1 CHROMAT_FILE:
MSMg01no113_c20.b1 PHD_FILE: MSMg01no113_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:32 2005
(462 letters)
>mm_chr9_88461048_88461909
Length = 862
Score = 804 bits (416), Expect = 0.0
Identities = 447/458 (97%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 2 ggaattctttcttttttccttttt-tttttgatttttttgagacagggtttctctgtagt 60
|||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctttttttttt--tttttctttttgatttttttgagacagggtttctctgtagt 260
Query: 61 tcccactgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatttgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccactgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatttgcct 320
Query: 121 gcctctgcctcccaagtgctgggattaaaggcttgcgccaccacaccctgtgagagtggg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctctgcctccctagtgctgggattaaaggcttgcgccaccacaccctgtgagagtggg 380
Query: 181 aattcttattgcacaacccatacaacatgacagtagtcaggctgcctccaactcttagta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 aattcttattgcacaacccatacaacatgacagtagtcaggctgcctccaactcttagga 440
Query: 241 ggcagagtgaggcgtgggtatgttcatgttcacctgcagccctatctgagtaaggcctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcagagtgaggcgtgggtatgttcatgttcacctgcagccctatctgagtaaggcctgg 500
Query: 301 ttaccccagtggtctcagttctcttacaacaacagtgaaggttttaattgtaatattatc 360
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 501 ttaccccagtggtctcagttctcttacaccaacagtgaaggttttaattataatattatc 560
Query: 361 aagtagtacattaatcaatcaataacatcaggatgggtttttaaaaaatttttttctggg 420
| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggcagtacattaatcaatcaatgacatcaggatgggtttttaaaaaatttttttctggg 620
Query: 421 ctggagagatgactcagcgattaagagcaatgactgct 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggagagatgactcagcgattaagagcaatgactgct 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_c20.g1 MSMg01no113_c20.g1 CHROMAT_FILE:
MSMg01no113_c20.g1 PHD_FILE: MSMg01no113_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:32 2005
(298 letters)
>mm_chr9_88857464_88858161
Length = 698
Score = 451 bits (233), Expect = e-131
Identities = 282/299 (94%), Gaps = 4/299 (1%)
Strand = Plus / Plus
Query: 1 attttccccaagtcaagtcatagtcaacaatcaggttatatgtcatcaccctgactttct 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attttccccaagtcaagtcatagtcaacaatcaggttatatgtcatcagtctgactttct 260
Query: 61 aatagtcaagacgggatcactgttctttctgctcctagaggaagaaactggagaggtttg 120
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 aatagtcaagaagggatcactgttctttctggtcctagaggaagaaactggagaggtttg 320
Query: 121 aacaaaagcagctaaataaaggaatatcaagccattattaaactcgatttgtgtgtgtga 180
||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 321 aacaaaagcagctaaatgaaggaaaaccaagccattattaaacttgatttgtgtgtgtga 380
Query: 181 gagagaga-cagagacagaca--gacagagagacatatagacagagagcctgagagacag 237
|||||| | |||||||||||| || |||||||||||||||||||||||| |||||||||
Sbjct: 381 gagaga-agcagagacagacacagagagagagacatatagacagagagcccgagagacag 439
Query: 238 agacagaaaatgactcacagagaaaactatctttcgttaagaccctgctccaattttta 296
|||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 440 agacagaaaaagacacacagagaaaactatcttttgttaagaccctgctccaattttta 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
