Query= MSMg01no114_c15.b1 MSMg01no114_c15.b1 CHROMAT_FILE:
MSMg01no114_c15.b1 PHD_FILE: MSMg01no114_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:47 2005
(238 letters)
>mm_chr9_42203034_42203671
Length = 638
Score = 412 bits (213), Expect = e-119
Identities = 237/257 (92%), Gaps = 19/257 (7%)
Strand = Plus / Minus
Query: 1 tgctctttggttacatccacattctcttcatctggtcatctactcaagaggcaagccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgctctttggttacatccacattctcttcatctggtcatctactcaagaggcaagccctt 488
Query: 61 ctcacccacgcacgccacatctaaaggcca-------------------ccaggtaccca 101
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 487 ctcacccacgcacgccacatctaaaggccacctctggacaccgagagctccaggtaccca 428
Query: 102 tggtggtatgacatccccacttcactgtcaccactgctctctctaatgcatggacacact 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tggtggtatgacatccccacttcactgtcaccactgctctctctaatgcatggacacact 368
Query: 162 ggaatagagcacataggtctctgtcttaatcacagaccatgtcccttctgttctttcctt 221
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 367 ggaatagagcacataggtctctgtcttaatcagagaccatgtcccttctgttctttcctt 308
Query: 222 tcccaaagacacaagat 238
|||||||||||||||||
Sbjct: 307 tcccaaagacacaagat 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no114_c15.g1 MSMg01no114_c15.g1 CHROMAT_FILE:
MSMg01no114_c15.g1 PHD_FILE: MSMg01no114_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:47 2005
(404 letters)
>mm_chr9_42078485_42079288
Length = 804
Score = 766 bits (396), Expect = 0.0
Identities = 402/404 (99%)
Strand = Plus / Plus
Query: 1 caactgtgaagggaggggaaacatgaacttgggagggagtagatgggagagaattggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caactgtgaagggaggggaaacatgaacttgggagggagtagatgggagagaattggatt 260
Query: 61 ggactggaaggaatgcagggtggacttgaactaaacacattgtatgcatgtacaaaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggactggaaggaatgcagggtggacttgaactaaacacattgtatgcatgtacaaaatta 320
Query: 121 gcactgtctctttgggtggtatgccagtttgagccaggttaacacactggataccaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcactgtctctttgggtggtatgccagtttgagccaggttaacacactggataccaaact 380
Query: 181 tgaaagagtgcctaatgaatttgagcaagcgccttatcgatctggaagatagtgacctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaagagtgcctaatgaatttgagcaagcgccttatcgatctggaagatagtgacctgg 440
Query: 241 gtggtttccacaaagatctttctcatttatgagagcacgttcttggtctcctcaagcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggtttccacaaagatctttctcatttatgagagcacgttcttggtctcctcaagcaca 500
Query: 301 atttgatgaatagcagagtggcccctgagttacaaatcacaaataaattcttactggtct 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 atttgatgaatagcagagtggcccctgagttacaaatcagaaataaattcttactggtct 560
Query: 361 tataaaggctagctgaatgtataaaaatggccaggaagtttaca 404
||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 tataaaggctagctgaatgtataaaaatggcaaggaagtttaca 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
