XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGAATTCA
TCATGATTACCAAGCTAATCCCAAGCTAATCTCAAATCCACTCTGCTCCT
GCTGCCTCAGACTCCTGACTCCTGCGATTGCAGCCATGTGCCACCACATT
CCTTAGTTTAGTCTATAATACAGTTGAAAGTCAGAATTCCTGATAGATGA
ACATATGCACGAGAACATATGTTCTGAAAATTAAAATAGAAAGCACTTTG
ACCATGGTGATAGTGTTAACTGTCAACTTGATAGAATCTAGAATCATGTG
GGCAACAGGCCCCTGTTGACATCTCTGTAGTATAATCTTGATTGATGTGG
GGAGGTCCACTAACTGTGGGTGGTGTCATTGCCTGGCTAGGATCCTGGAC
TGAGCAGTATTGTACATTCTTCATTCTCTGATTTCTGATTGTGAATCTGA
TGTGATCTGCTGGTACAAGCATTTACAGCCTGGATTTTGCCACCATGGTT
ACCGTATCTTTAAACTGTGAGCCACAGAAAGTCCTCCCTCCCTTGGGTTC
CCTTTGCCAATGGTGTATCATGGGAATAGGTAAATAAACTAAGGCTATCA
ATCATACAATAGTGGAGATGAGCTGGCTGAGGCTGTTGAGTTTTTGAGCC
TGGCTGTAAGGTCCTGTGCGCGTCTGGCCTTGGCAGCCAGACAACAGAAA
AGGTACTGCAG

GGCGGCCGACTGGATCCAAAXXXXXXXXXXXXXXXXXXXXXXTTCTCCCG
AAAATCTCCTTTCCAATAAAAAATAAACCCTGGCTTATCCCCTCTCTTTC
CTCCGAATTAAAAAACTACCCACCCCCAATTTAAGTGGGCTTAGGGCCAC
CGGGTTAAAAAATTTTGCCCAAAGAGGAAAAACCCCGGAAAATTTTTTCC
CCTTTCCCGGGAGGGTTTACAAATTTTTCCCGGGGGGGGTTTTTTGGGAT
GGGAAAAAAATTTCCGGGGCCCTCACGGGGGGTGGGTTTTTTCTCTAATA
ATCCTTACATTTTTTGGTTCTTCTCGTGGGCACTCTTTTTTACACCCTCC
TGGTGCCCAATACAAAAATTCTATTTCTCTCGGATACAACCCTTTTTCGC
CGCGCCTCCTTCCTCCTTTTTTTTGTGCAGCGGGCGCCCGCTTACTTTAT
TCCCCCATCCCCATATGAAGCTGGTCCCTTATTTTTGTGCGCGGCCGCCC
TGCTTTTGTTATCCCTTTTCTTCCTCCCCCCTATTCCCCTCTCTCTCCTC
CCTTTTCCCCCCCCAATACCTCATTAACCCGCATATTCCCGCATCTTCTC
TCTTTTTCTCTCCTATATTAATCCCCTCCCTTCCTGTCCCCCTCCTCTTT
TTTTTCCGCCTTTCGTTTATTTTTTCCCCTCGTCTTTTCCCCTCTCCTTC
TTCATTCCCCCCTCTTCTTTTTTTTCTCCCCCTCCTCCTTTTTCTCCGTG
CTCTCTTCGTTTTCCCCCTCTTTTTTTTCC

Query= MSMg01no114_i03.b1 MSMg01no114_i03.b1 CHROMAT_FILE:
MSMg01no114_i03.b1 PHD_FILE: MSMg01no114_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:12 2005
         (575 letters)



>mm_chr9_41970599_41971573
          Length = 975

 Score =  982 bits (508), Expect = 0.0
 Identities = 517/520 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattcatcatgattaccaagctaatcccaagctaatctcaaatccactctgctcctgc 64
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattcatcatgaagaccaagctaatcccaagctaatctcaaatccactctgctcctgc 461

                                                                       
Query: 65  tgcctcagactcctgactcctgcgattgcagccatgtgccaccacattccttagtttagt 124
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgcctcagactcctgagtcctgcgattgcagccatgtgccaccacattccttagtttagt 401

                                                                       
Query: 125 ctataatacagttgaaagtcagaattcctgatagatgaacatatgcacgagaacatatgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctataatacagttgaaagtcagaattcctgatagatgaacatatgcacgagaacatatgt 341

                                                                       
Query: 185 tctgaaaattaaaatagaaagcactttgaccatggtgatagtgttaactgtcaacttgat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctgaaaattaaaatagaaagcactttgaccatggtgatagtgttaactgtcaacttgat 281

                                                                       
Query: 245 agaatctagaatcatgtgggcaacaggcccctgttgacatctctgtagtataatcttgat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agaatctagaatcatgtgggcaacaggcccctgttgacatctctgtagtataatcttgat 221

                                                                       
Query: 305 tgatgtggggaggtccactaactgtgggtggtgtcattgcctggctaggatcctggactg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tgatgtggggaggtccactaactgtgggtggtgtcattgcctggctaggatcctggactg 161

                                                                       
Query: 365 agcagtattgtacattcttcattctctgatttctgattgtgaatctgatgtgatctgctg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 agcagtattgtacattcttcattctctgatttctgattgtgaatctgatgtgatctgctg 101

                                                                       
Query: 425 gtacaagcatttacagcctggattttgccaccatggttaccgtatctttaaactgtgagc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gtacaagcatttacagcctggattttgccaccatggttaccgtatctttaaactgtgagc 41

                                                   
Query: 485 cacagaaagtcctccctcccttgggttccctttgccaatg 524
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  cacagaaagtcctccctcccttgggttccctttgccaatg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)