Query= MSMg01no116_e23.b1 MSMg01no116_e23.b1 CHROMAT_FILE:
MSMg01no116_e23.b1 PHD_FILE: MSMg01no116_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:32 2005
(566 letters)
>mm_chr9_83546612_83547577
Length = 966
Score = 1056 bits (546), Expect = 0.0
Identities = 558/562 (99%)
Strand = Plus / Minus
Query: 5 gaattctttaccttgatctatttctgtagaactttatatgtacccccaccccacttacta 64
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 766 gaattctttaccttgatctatttctgaagaactttatatgtacccccaccccacttacta 707
Query: 65 gtcacattcatcctttatctttagtctttctcatcaactagactatttcccaaaagtaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gtcacattcatcctttatctttagtctttctcatcaactagactatttcccaaaagtaca 647
Query: 125 taggtttttcctgttattttcaatgcagtgatgcacactaagtatctgttatatacatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 taggtttttcctgttattttcaatgcagtgatgcacactaagtatctgttatatacatta 587
Query: 185 atgtgtgaacactgggtttccaatatcacgtggttcattgcaccagctcggtcaggtggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 atgtgtgaacactgggtttccaatatcacgtggttcattgcaccagctcggtcaggtggc 527
Query: 245 ctcccctctgtgggcttctttctcgcctcccttttcatattctcttcctcgctttcagat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctcccctctgtgggcttctttctcgcctcccttttcatattctcttcctcgctttcagat 467
Query: 305 ctgatgtctgtttttacttcgtgatgaaaatatggagggatattttccctgggcctcctg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 466 ctgatgtctgtttttacttcgtgatgaaaatatggagggatattttccctggacctcctg 407
Query: 365 aattctctttcctcctccttcatgattctttgcctcggatgtgcctcctggtactttctt 424
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 406 aattctctttcctcctccttcatgcttctttgcctcggatgtacctcctggtactttctt 347
Query: 425 tccatcccctgcccccaggtcctctggaaggaaggtgccttggttttctgacagacatgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tccatcccctgcccccaggtcctctggaaggaaggtgccttggttttctgacagacatgt 287
Query: 485 gggctctggtgccctggaagagaggaaatgaagaggcccttcctgcactctgggactaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gggctctggtgccctggaagagaggaaatgaagaggcccttcctgcactctgggactaga 227
Query: 545 gagaaggtccggggaaaggggg 566
||||||||||||||||||||||
Sbjct: 226 gagaaggtccggggaaaggggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_e23.g1 MSMg01no116_e23.g1 CHROMAT_FILE:
MSMg01no116_e23.g1 PHD_FILE: MSMg01no116_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:32 2005
(439 letters)
>mm_chr9_83456509_83457350
Length = 842
Score = 816 bits (422), Expect = 0.0
Identities = 437/442 (98%), Gaps = 3/442 (0%)
Strand = Plus / Plus
Query: 1 tgtttcc-tttaaaagaaaaaaa-tcattctgttaatgagatgaagtctctgtatgaggg 58
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttccatttaaaagaaaaaaagtcattctgttaatgagatgaagtctctgtatgaggg 260
Query: 59 tcagagggcctggcagagtcccattgtccctcagtgttaacacccaaatgtctggatgct 118
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 tcagagggcctggcagagtcccattggccctcagtgttaacacccaaatgtctggatgct 320
Query: 119 tgacctggcacctgggcagtctgacctgtttctggtctgtctgtgtagctttctctcgcc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacctggcacctgggcagtctgacctgtttctggtctgtctgtgtagctttctctcgcc 380
Query: 179 ataaatacaccaggcttctcctccaccctggctggtcctgtggtcctctccaccttgtct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaatacaccaggcttctcctccaccctggctggtcctgtggtcctctccaccttgtct 440
Query: 239 gaggactccctatgtgacatgcagtcccattcccttcgctcttcaaagcatggggcaggg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggactccctatgtgacatgcagtcccattcccttcgctcttcaaagcatggggcaggg 500
Query: 299 ctgtttccccacgctccctttgcctctctcttcttgctgtccaaagtgggagggctcttc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtttccccacgctccctttgcctctctcttcttgctgtccaaagtgggagggctcttc 560
Query: 359 aatttc-gcccaccatgccacctgtagggtggctctcagggccttctgcctgtgatttat 417
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatttcagcctaccatgccacctgtagggtggctctcagggccttctgcctgtgatttat 620
Query: 418 aggaattctaatttcttctggg 439
||||||||||||||||||||||
Sbjct: 621 aggaattctaatttcttctggg 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 842
Length adjustment: 9
Effective length of query: 430
Effective length of database: 833
Effective search space: 358190
Effective search space used: 358190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
