CCCTTCATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTGAAAGTCTTCATTTCTTTCTTTATTTCTTATTTTTTC
AATTTTTTATTAGGTATTTTCTTCATTTACATTTCAAATGCTATCCTGAA
AGTCCCCTCTACCCTCCCTACTCCCTGCTCCCCTACCCACCTACTCCCAC
TTCTTGGCCCTGATGTTCCCCTGCTCTGGGGCATATAAAGTTTGCAAGAC
CAAGGGGCTTCTCTTCCCAGTGATGGCCGACTAGGTCATCTTCTGCTACA
TATGCAGCTAAAGACACGAGCTCTGGGGGTACTGGTTAGTTCATATTGTT
GCTCCACCTATAGGGTTGCAGACACCTTCTGCTCCTTGGGTACATTCTCT
AGCTCCTCCATATGGGGCCTTATGTTCCATCCAATAGCTGACTGTGAGCA
TCCACTTCTGTGTTTGGCTTTTCTCCTTACAGCTTTTAATATTCTTTCTT
GGTTCTAAACATTTAGCAGATTTTCTTTTATGGTCAATCTAACTGGTGTT
CTGTACATTTATAGGCATCTCTTTCTTTAGGTTAGGGAAATTTTCTTCTA
TGATTTTGAAAACATTTTCTGGGCCTTAGAGCTGGGAATCTTCTGCTCTT
TCTATTCCTACTTTTCTTAGCTTTGGTCTTTTCACACTATCCCAAATTTC
CTGGATTTTTTTGCGTTA

NNTTACGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAGACTTAACTTTTTATTTT
ATGATCTAGTTGTTTTGTAAATACAAGTTGTGGAACTTGACTATCAACAA
GAGGAGGGAAAATTTTGAGGTGCTGATTAAAAGGATTTCCTACTTGTAAG
ATCCTGGTCGCTTTGTTTGTTGATATAATCAAGACTCATGTGATAGGTAT
CTAACATATCTTGTATAAATATTTAAGTACATGAATAATTGAATTATAGA
AAAAAAGCCAAAGTGTAGATCTAATTAAGCAAAAGTGAACTGTGGACATT
TTAGTTGTTTTATTGTAGAAGTGGGTAAAATGTTAATAGAATTTTCAATC
ACCCAAAGGCTTTTTATATGTTTTCATGAATTCAAATATTATACTTAGAA
TAGATTCCACGTTTAAAATTTGTTATTTAATATGGTACTTTGAAATGCCC
CCAAGGATTTCTTTGGCTTTCCCCTTTCAAATGGACAAAAGTGTTATATG
CTTCATAGCTCATATTTTATATCTATAAATAGCACAAAGTTTGATCTTGG
TAGAATGATTATAAAACAAAAGAATCATTTTAATTTTGGAAAATTTCTGT
CTTACTAAGAAAACTTAGGGAACGGTGAGTCAGAAGCTCTCAATGGTTGG
TTGCTATGATAGTTGTTATTT

Query= MSMg01no116_k12.g1 MSMg01no116_k12.g1 CHROMAT_FILE:
MSMg01no116_k12.g1 PHD_FILE: MSMg01no116_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:58 2005
         (590 letters)



>mm_chr9_16807193_16808182
          Length = 990

 Score = 1118 bits (578), Expect = 0.0
 Identities = 587/590 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaagacttaactttttattttatgatctagttgttttgtaaatacaagttgtggaactt 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaacacttaactttttattttatgatctagttgttttgtaaatacaagttgtggaactt 260

                                                                       
Query: 61  gactatcaacaagaggagggaaaattttgaggtgctgattaaaaggatttcctacttgta 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactatcaacaagaagagggaaaattttgaggtgctgattaaaaggatttcctacttgta 320

                                                                       
Query: 121 agatcctggtcgctttgtttgttgatataatcaagactcatgtgataggtatctaacata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatcctggtcgctttgtttgttgatataatcaagactcatgtgataggtatctaacata 380

                                                                       
Query: 181 tcttgtataaatatttaagtacatgaataattgaattatagaaaaaaagccaaagtgtag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttgtataaatatttaagtacatgaataattgaattatagaaaaaaagccaaagtgtag 440

                                                                       
Query: 241 atctaattaagcaaaagtgaactgtggacattttagttgttttattgtagaagtgggtaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctaattaagcaaaagtgaactgtggacattttagttgttttattgtagaagtgggtaa 500

                                                                       
Query: 301 aatgttaatagaattttcaatcacccaaaggctttttatatgttttcatgaattcaaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgttaatagaattttcaatcacccaaaggctttttatatgttttcatgaattcaaata 560

                                                                       
Query: 361 ttatacttagaatagattccacgtttaaaatttgttatttaatatggtactttgaaatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttatacttagaatagattccacgtttaaaatttgttatttaatatggtactttgaaatgc 620

                                                                       
Query: 421 ccccaaggatttctttggctttcccctttcaaatggacaaaagtgttatatgcttcatag 480
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 ccccaaggatttctttggctttcccctttcaaatggacaaaattgttatatgcttcatag 680

                                                                       
Query: 481 ctcatattttatatctataaatagcacaaagtttgatcttggtagaatgattataaaaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcatattttatatctataaatagcacaaagtttgatcttggtagaatgattataaaaca 740

                                                             
Query: 541 aaagaatcattttaattttggaaaatttctgtcttactaagaaaacttag 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaagaatcattttaattttggaaaatttctgtcttactaagaaaacttag 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)